Transcript Information: S_Transcript_11583.p1


Annotated TAIR IDAT5G15020.1
Annotated Gene NameSIN3-like 2
Annotated Gene Symbol(s)SNL2
Annotation TypeOrtholog
Chromosome Positionchr5:4859408-4865569 | Reverse length=1367
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.896961821088
Replicate 231.094340838369
Replicate 333.528570643212
Condition 2: 8 Hour
Replicate 135.947624321132
Replicate 234.800653439575
Replicate 334.077309000069
Condition 3: 24 Hour
Replicate 140.911251098613
Replicate 233.200495905702
Replicate 332.984091696457


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_11583.p1 GENE.S_Transcript_11583~~S_Transcript_11583.p1 ORF type:complete len:1368 (+),score=363.00,Sin3a_C|PF16879.1|3.2e+02,Sin3a_C|PF16879.1|4.5e-54,PAH|PF02671.17|1.6e-15,PAH|PF02671.17|7.2e-18,PAH|PF02671.17|8.6e-12,PAH|PF02671.17|2.3e+03,Sin3_corepress|PF08295.8|1.7e-34 S_Transcript_11583:406-4509(+)
ATGAAGAGATTAAGGGATGAGAGCTATACTGGCTCTCAATTCAAACGCCCTTTTGGCACTTCTCGAGGAGAATCATATGGGCAACCTCAGAACACAGTGGGAGGTGCCGGTGGAGGTGGTGGCGGCGGTGGCAGCGGAGGACAGAAATTGACAACTGATGATGCCCTTCAGTATCTTAAGGAAGTGAAGGAGATGTTTCAGGACCAAAGGGAGAAATATGATCAATTCCTTGAGGTCATGAAAGACTTTAAGGCTCAAAGAATTGATACAGAAGGTGTCATAGCCCGGGTGAAGGAATTATTTAAAGGGCATAACAACCTGATCTATGGATTTAATACCTTTTTGCCAAAGGGTTATGAGATCACCCTAGATGACGAGGAGCCTCCTCCAAAGAAAGCAGTAGAATTTGAAGAGGCTATCAATTTTGTTAACAAGATAAAGAAACGCTTCCAAAGTGACGATCAAGTATATAAATCTTTCCTTGACATATTAAATATGTACCGTAAAGAGCATAAGACCATCAGTGAAGTTTATGTTGAGGTTTCACAGCTTTTTGATGATCACCCAGATCTGCTTGACGAGTTCACTCGATTCTTGCCGGATAATTCATCAGCAGCAACTGTTCATCATTCTCAGCATGGTCGAATCACCTTTCCACGTTATGAAGAAAGAAGCTCCGCTGTGCCTCCATCCCGACAACAGCCTATGGACAAGCGATGGCGTAGAGACAGAGTTGGTACTTCCCATGCTGAGCATGATCTTCGCACTGAGCGTCCTGAAATGGATGATGATAGAGCTGCAAAGGTGCACAAGGATCAGAGGAAGCGAGATAAAGATAATCGTGATCGAAGGAACAGGGATCTGGATGATAGGGAACCTGAGCATGATAATAATAGGGATTTCAACATCCAACGCCTTCCCGACAAAAGGAAGCCTGCCCGCAAAGTTGAAGGTTTTGGACCAAATCCTGCTATGGCATCTTCTGATGATAAAAGGGCCTTGAAAAGCATGTACAGCCAAGAATACCTTTTCTGCGAGAAGGTCAAGGAAAAACTGGGGAACTCAGATGATTATCAGGCATTCTTGAAATGTCTGCACATTTATAGCACAGAAATAATAACCAGAAGTGAATTGCAAAGTTTGGTTGCTGACCTATTGGGGAAGTATCCAGATCTCATGGAAGGGTTCAATGAATTCTTGGAACATTGTGAGAATATGGATGGATTCCTTGCTGGTGTTATGGGCAAGAAGTCTGTGTGGAATGATGGACATTTGCCACGATCATTGAAGACAGATGACAAAGAGAAAGCACCCAAGCGTGAACTGGAGCCGGCTAAAGAGAAGCCAAATAGGGATTATACTTCTAAATCCATTCAGGAACTTGATCTTTCTAATTGTGAACGCTGCACTCCTAGCTATCGGCTTTTACCTAATGACTATCCAATACCTACTGCAAGCCAGCGATCGGAAATTGGTGCCCAAGTGTTGAATGACTACTGGGTTTCTGTGACGTCTGGGAGTGAGGATTACTCCTTTAAACACATGCGGAGGAACCAATATGAAGAAAGTCTTTTCAGATGTGAAGATGACAGATTTGAGTTGGACATGCTATTGGAGTCAGTGAGCTCAACTGCCAAGCGAGCTGAAGACTTGCTAAATAACATCAATAATAACAGCATTGGAGCAGATGGCCCTATTCGTATTGAAGACTACTTTACACCTCTTAATATAAGGTGCATTGAGCGTCTCTATGGTGACCATGGTTTGGACGTTATGGACATATTGCGTAAAAGTCCTGCTCTTGCATTGCCAGTCATCTTAACTCGCCTGAAGCAGAAACAAGAAGAGTGGACGAAGTGTCGTACAGATTTTAACAAGGTTTGGGCTGAAATTTATGCAAAGAACCACTACAAGTCACTTGATCATAGGAGCTTCTATTTCAAGCAGCAAGATTCCAAGAACTTGAGCACTAAGTCCTTGGTCGCAGAGATAAAAGAAATTAAAGAGAACATGCAGAAAGAAGATGACATGCTTCTGGCGGTTGCTGCTGGAAACAAAAGGCCTTTGGTTCCTCATTGGCAATTTGAGTACCCGGACAGCGAAATTCATGAGGACTTGTATAAATTAATAAAATATTCTTGTGAGGAGGTCTGTACAACCAAAGAGCAGTTGAACAAAGTCATGAGGCTATGGACCACCTTTCTGGAGACTATGCTGGGGGTGACATCACGGGCCCGTGGGGGTGACAGTGTTGAAGATGGTAAAGCTCGACAACGGACTTCAAGAAATGGTGGAGGACTCATAGCAGAAAGGGGTGAAAGCCCTGGTTCTGATGCTGCTAATACGAACCACAAGAAATTGGTGAACGGAGATGAGAACTCACAGGCTGATTTCTCGAAATTTTCCAGGACTAATGGTGATACTACAGCTAGAGAGGGTAGCTTCCGTGAGTCGGATGCAGTATGTAAAGAAAGCTCATCAACTAATCCCCAGCCCAAGACTCAGGATGAAGTAGGTGCTGCTGATAGAGCACCAGAGCGACTTCTTGGTTCCACTGCATCACCACAAAATGGTGGACAAAGCCACCATGCTAGAAGCAACGTAGAACCAACATCAGGTCCTCAATCATCTCCGTCAAGGCCACATAATGCTGCTGAGGATGGTCGCGGGCCTGCTGCCATTCAGTCAATATCAGGGGCTCCTGATGTTTCGGCTGCTACATTGGCCAATGGAAACCTTGCACAAAGTTCCAAGGCAAATCGTTATGTTGAAGAATCTGTTGGGCATTCCAAAGGTGAAAAGGAAGAGGGGGAGTTGTCACCTAATGGGGATGTTGATGAGGACAACTCTGTTGCATATGCAGATGCAGGTGCCCAAGCTGGTCCCCAAACAAACCTTAGTGCAGAAAACCAGCGATATCGAGATACCAATGGTGAGGATGCTGGGGCAGGCAATGATGCAGACGCAGATGATGAGGACAGTGAAAATGCTTCTGAGGCTGGTGATGATGTTTCAGGCAGTGAATCAGCTGGTGATGAGTGTTCTCGTGAAGACCACGAGGAAGAGGAAGATGTTGAGCGTGATGAGCTTGAAGTTAAGGCTGAGAGTGAAGGTGAAGCTGAGGTACACTATTCGGGCAGTGATGGAACCACCTTACGGTTATCAGAGCGTTTCTTGTTGTTGGTAAAGCCACTTGTGAAGTATGTTTCTTCCATTTCACGGGACACTGAGAAAAAAGATTCTAGAATTTTCTATGGAAATGACAACTTTTACAGTCTTTTCAGGCTTCATCGAACATTGTATGAAAGGATACTTACAGCAAAAATAAGCTCGAGATCTTCTGAAACAAAATGGAGAAATTCAAAGGATGCCAGCAATTTGGATCCTTATGCAAGTTTTATGAGTGCCCTTTATTACTTGCTTGACGGTTCATCTGATAATGCAAAGTTTGAGGATGATTGCCGAGCTGTTATTGGAAATCAATCATATGTGTTGTTTACATTGGACAAGCTGATATATAAACTTGTTAAACAGCTTCAAGCTGTTGCAACTGATGAGTTGGACAATAAGCTTCTCCAACTATATGAATATGAAAAGTCGCGTAAACCTGGAAAATTTGTTGACTCAGTCTACCATGAAAATGCCCGTGTTCTACTTCATGATGACAACATATATCGATTCGAATTTTATTCTTCCCCTACGCACATGTCAATCCAGCTGATGGATAATGGAAATGAGAAGCCTGAGATGGTGGCAGTTTCTATAGAGCCAAATTTTGCAGCTTATATGTACAACGATTTTCTTTCAGTCACCTCCAGCAGAAAGGAGCCTCAAGGAATCATGCTGCAAAGGAGCAAACGAAAGTACATGGGTCTTGATGAATATTCAGCTACATCAAAAGCCATGGAAGGCGTCCAAATATTTAATGGCTTGGAATGTAAAATAGCTTGCAGCTCATCCAAGATATCTTATGTTCTAGACACTGAAGATTACCTTTCTCGAATGAAGAAGATGAGGAAAAGTTTGCCTGCAGAACTGCGTGTTGAGCTTAATCAGGCAAGAGTACAGAGATTTCACAAGTTTTTGTCAGTAGCATGCAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_11583.p1 GENE.S_Transcript_11583~~S_Transcript_11583.p1 ORF type:complete len:1368 (+),score=363.00,Sin3a_C|PF16879.1|3.2e+02,Sin3a_C|PF16879.1|4.5e-54,PAH|PF02671.17|1.6e-15,PAH|PF02671.17|7.2e-18,PAH|PF02671.17|8.6e-12,PAH|PF02671.17|2.3e+03,Sin3_corepress|PF08295.8|1.7e-34 S_Transcript_11583:406-4509(+)
MKRLRDESYTGSQFKRPFGTSRGESYGQPQNTVGGAGGGGGGGGSGGQKLTTDDALQYLKEVKEMFQDQREKYDQFLEVMKDFKAQRIDTEGVIARVKELFKGHNNLIYGFNTFLPKGYEITLDDEEPPPKKAVEFEEAINFVNKIKKRFQSDDQVYKSFLDILNMYRKEHKTISEVYVEVSQLFDDHPDLLDEFTRFLPDNSSAATVHHSQHGRITFPRYEERSSAVPPSRQQPMDKRWRRDRVGTSHAEHDLRTERPEMDDDRAAKVHKDQRKRDKDNRDRRNRDLDDREPEHDNNRDFNIQRLPDKRKPARKVEGFGPNPAMASSDDKRALKSMYSQEYLFCEKVKEKLGNSDDYQAFLKCLHIYSTEIITRSELQSLVADLLGKYPDLMEGFNEFLEHCENMDGFLAGVMGKKSVWNDGHLPRSLKTDDKEKAPKRELEPAKEKPNRDYTSKSIQELDLSNCERCTPSYRLLPNDYPIPTASQRSEIGAQVLNDYWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVSSTAKRAEDLLNNINNNSIGADGPIRIEDYFTPLNIRCIERLYGDHGLDVMDILRKSPALALPVILTRLKQKQEEWTKCRTDFNKVWAEIYAKNHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKEIKENMQKEDDMLLAVAAGNKRPLVPHWQFEYPDSEIHEDLYKLIKYSCEEVCTTKEQLNKVMRLWTTFLETMLGVTSRARGGDSVEDGKARQRTSRNGGGLIAERGESPGSDAANTNHKKLVNGDENSQADFSKFSRTNGDTTAREGSFRESDAVCKESSSTNPQPKTQDEVGAADRAPERLLGSTASPQNGGQSHHARSNVEPTSGPQSSPSRPHNAAEDGRGPAAIQSISGAPDVSAATLANGNLAQSSKANRYVEESVGHSKGEKEEGELSPNGDVDEDNSVAYADAGAQAGPQTNLSAENQRYRDTNGEDAGAGNDADADDEDSENASEAGDDVSGSESAGDECSREDHEEEEDVERDELEVKAESEGEAEVHYSGSDGTTLRLSERFLLLVKPLVKYVSSISRDTEKKDSRIFYGNDNFYSLFRLHRTLYERILTAKISSRSSETKWRNSKDASNLDPYASFMSALYYLLDGSSDNAKFEDDCRAVIGNQSYVLFTLDKLIYKLVKQLQAVATDELDNKLLQLYEYEKSRKPGKFVDSVYHENARVLLHDDNIYRFEFYSSPTHMSIQLMDNGNEKPEMVAVSIEPNFAAYMYNDFLSVTSSRKEPQGIMLQRSKRKYMGLDEYSATSKAMEGVQIFNGLECKIACSSSKISYVLDTEDYLSRMKKMRKSLPAELRVELNQARVQRFHKFLSVACR*

Click here to download the sequence:
Link to NCBI Protein BLAST