Transcript Information: S_Transcript_115866.p1


Annotated TAIR IDAT5G50340.1
Annotated Gene NameATP-dependent peptidases;nucleotide binding;serine-type endopeptidases;DNA helicases;ATP binding;damaged DNA binding;nucleoside-triphosphatases
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20491635-20495830 | Reverse length=587
E-Value1.5E-237
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.1280893005065
Replicate 24.5509054367811
Replicate 34.1693974314411
Condition 2: 8 Hour
Replicate 17.1436538521089
Replicate 27.2357794280304
Replicate 38.3715705115273
Condition 3: 24 Hour
Replicate 14.8303867784482
Replicate 24.3756863934532
Replicate 33.9539508555875


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_115866.p1 GENE.S_Transcript_115866~~S_Transcript_115866.p1 ORF type:complete len:606 (+),score=106.96,AAA_25|PF13481.2|1.3e-25,KaiC|PF06745.9|3.3e-07,KaiC|PF06745.9|0.015,ChlI|PF13541.2|2.8e-08,DnaB_C|PF03796.11|5.9e-06,DnaB_C|PF03796.11|53 S_Transcript_115866:184-2001(+)
ATGCAAGCATTAGAAATGGGAGCTTTCCATCTTGTTCGTTCTCAATCTCACCTTCTCACTTTCCCCAAATTCAAACTCCTCTCACCTCCTCGTAAAATCATCTGCCATTCCCAAAATCAAAACCCTCAATTTTCCCGCCATTTCAAACCCCCAAATTCACGCCCAATTCACTCATTCAACCACAAATCCTTCCCTGAATCACCGCTCCTTGACCCCAATACTCAAAACAACGAAAACCCACCAACCCCAGAAGAACCCATCCCTACCCAAAACCCTAGAACTTGGTCAGTCTTCTATGGAGGACAACAAGTTGACAACAAGGTTAGTGGGTATGCAAGGAATTATGTTGGCAAAGGGAAAAAAGGCAAGAATAATAATAAGATGTATTGGGTTTGTAGTGATTGTGGCCATAGTGAAGGCCAATGGTGGGGGACTTGTAAGTCTTGTAATAAAGTTGGCACCTTGAAGCCATTTTCCGTGTCCGAAAATGTGGATGGAAATAAGAGTGTTGGGGTTCTGGTTTCCGAGGAGGTGACTAGGTCTTGGTTGCCTGACCAGAAGCAGGGTGGGCCAGTCAGGTTGGCCGATGTTAATCGTGGGATGAATCATTTGGATTGGAGAATTCGATTGTCTGGGACGTTTGGTACTGAAGTTGCGAGAGTGCTTGGTGGCGGAGTTATGCCAGGTTCCTTGATTCTAGTTGGTGGCGATCCCGGTGTTGGCAAGAGCACCCTTTCATTGCAGATTGCTGCATTAATAGCAGAAAGTTGTGATGTTGGTGGAGCTGCTCCAGTCATTTACATCTCTGGTGAAGAGAGTGTTGAGCAAATTGGAAACAGAGCAGATCGCCTGAACATCGACACAGAAGAGCTCTATCTGTATTCAAGTACTGATATTGAGGATATTTTAGGAAAGGTTCAAGTGCTAGGTCCACGTGCTCTGATAATCGACTCCATCCAGACAGTATATTTAAAAGGAGTAACGGGAAGTCCTGGAGGGCTGGTGCAGGTAAAAGAATGTACATCAGCATTGCTTCGGTTCTCAAAGAAAACAAACATCCCTGTTCTATTGATTGGACATGTGAACAAGTCTGGAGACATTGCAGGACCTCGAGTTTTGGAGCACATTGTTGACGTTGTTTTATATATGGAGGGAGAAAAGAATTCATTATATCGCTTACTTCGGTCTGTGAAAAACCGTTTTGGATCCACTGATGAGTTGGGAGTATTCGAAATGTCAGAGTCTGGGCTTATAGCAGCATCAAACCCGAGTGAGATATACTTGAATGAGGAGCTTTCAGATTCAGATCATTTAGCTGGACTTGCTGTTGCAGTAATCATTGATGGCTCTCGATCTTTTCTTATTGAAGTCCAGGCACTGTGTGTATGTGGAGCCTCTGTTACTAGGCATGTTAACGGGGTTCAAGCAAGCAGAGCTGATATGATTATTTCGGTTCTTAAAAAGCAGGCTGGGCTGAAGCTTGAAGATAATGCAATATTCCTCAATGTTATTAGCGGAGTATCTCTGACAGAAACTGCAGGAGATCTTGCTGTAGCAGCAGCAATTTGCAGCAGTTTCTTGGAGTTTCCAATTCCAAATCATGTAGCATTTATCGGAGAAATTGGCCTTGGAGGTGAGCTTCGAATGGTTCCTAGAATAGAAAAAAGGGTCAATACATTGGCTAAACTCGGCTATAAGACGTGCATTGTCCCAAAGTCAGCTGAAAAAGCTCTAGCAAATTTTAACTCTGAAGGTATACAGATGGTGGGCTGCAAGAATTTGAAACAAGTCATTGATAAGGTCTTCAGAACAGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_115866.p1 GENE.S_Transcript_115866~~S_Transcript_115866.p1 ORF type:complete len:606 (+),score=106.96,AAA_25|PF13481.2|1.3e-25,KaiC|PF06745.9|3.3e-07,KaiC|PF06745.9|0.015,ChlI|PF13541.2|2.8e-08,DnaB_C|PF03796.11|5.9e-06,DnaB_C|PF03796.11|53 S_Transcript_115866:184-2001(+)
MQALEMGAFHLVRSQSHLLTFPKFKLLSPPRKIICHSQNQNPQFSRHFKPPNSRPIHSFNHKSFPESPLLDPNTQNNENPPTPEEPIPTQNPRTWSVFYGGQQVDNKVSGYARNYVGKGKKGKNNNKMYWVCSDCGHSEGQWWGTCKSCNKVGTLKPFSVSENVDGNKSVGVLVSEEVTRSWLPDQKQGGPVRLADVNRGMNHLDWRIRLSGTFGTEVARVLGGGVMPGSLILVGGDPGVGKSTLSLQIAALIAESCDVGGAAPVIYISGEESVEQIGNRADRLNIDTEELYLYSSTDIEDILGKVQVLGPRALIIDSIQTVYLKGVTGSPGGLVQVKECTSALLRFSKKTNIPVLLIGHVNKSGDIAGPRVLEHIVDVVLYMEGEKNSLYRLLRSVKNRFGSTDELGVFEMSESGLIAASNPSEIYLNEELSDSDHLAGLAVAVIIDGSRSFLIEVQALCVCGASVTRHVNGVQASRADMIISVLKKQAGLKLEDNAIFLNVISGVSLTETAGDLAVAAAICSSFLEFPIPNHVAFIGEIGLGGELRMVPRIEKRVNTLAKLGYKTCIVPKSAEKALANFNSEGIQMVGCKNLKQVIDKVFRTA*

Click here to download the sequence:
Link to NCBI Protein BLAST