Transcript Information: S_Transcript_115908.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value1E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1880804122848
Replicate 21.2475982190261
Replicate 30.93311462327741
Condition 2: 8 Hour
Replicate 10.57121581206606
Replicate 20.39949729713797
Replicate 30.50752018107098
Condition 3: 24 Hour
Replicate 10.84518894457656
Replicate 20.60706638150931
Replicate 30.7506560834856


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_115908.p1 GENE.S_Transcript_115908~~S_Transcript_115908.p1 ORF type:5prime_partial len:336 (+),score=42.71 S_Transcript_115908:2-1009(+)
TTCTTCTTTGATTTGTTTTTCTCTCAATATTGTGTGTGTGTTGATTCGATCGGAACGCCTTCGATCCTAACACTTTTCTGCCTTCTAAGGGCATTCGCCAAGGCTATCCTGTCTCGCCCTACATTTTTGTGCTCTACATGGATTGTTTATCTCAAAATGATTGAGACGCAGGTGACTAGTGGCTATTTTATCCCTGTGTCGATTGATCAACACCTGAAAATCTCTAATGTCTTTTATGCAGATGATGTTTTATTATTTGGTCGGGCTACCCCGTCAAATGTGAAGGCAATTATTGACGTTCTTGATTGCTTTGGGGATGTTTCTGGCCTTTGGATTAATAAATCCAAGTCTAAAATCATTTTCCCGCCAGCCATGCATCATCAGTTTAGACGCCTTATTACTGGGGCATGTGGGATTCCGGGTAGTACTTTCTTTGGAAATTACCTTGGCCTTCCTCTTTCAGCGAATAAACTTAAGGTTGCTGATTTTCATTTTCTTCTTGACAAAGTCAAATCTCGGCTCCAGGGGTGGCAAGGGCATTATCTTAACTTGGCAGGAAAATGCACCTTGATTAAATCTGTTTTGAGTGCCCTTCCCGCATATATTATGCAGGTGGTTAAGCTGCCTTCCACTGTTGTTGACCACCTTGAAAAAGCCATGCACCTCTTTCTTTGGAGTAAGTCTAACTCATCGCGTTTTCTGCCGAGAGTTAGTTGGGAGGAGGTTTGCAAACCTCTAGTTGTTGGGGGTTTGGGGATTAGGAGACTCAAAGATTGGAATTTGGCTTTCCTGGCCAAGCTTGCTTGGAGATTTTTAAGGGATGAAAATAGGCTTTGGGTGAGGGTTCTTAGGGCCAAATATTTGAAAAATCAGTCCTTTCTTAGTGCTCTAGTCCCATACAACTCTTCTCACATTTGGAGGGTTGTTCTTGTGGGAAAAGAAAAACTCCTAGAGTGGCTTAAGGTGAGAATTGGAAATGGCTCTGATACCTCCCTTTGGTTTGATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_115908.p1 GENE.S_Transcript_115908~~S_Transcript_115908.p1 ORF type:5prime_partial len:336 (+),score=42.71 S_Transcript_115908:2-1009(+)
FFFDLFFSQYCVCVDSIGTPSILTLFCLLRAFAKAILSRPTFLCSTWIVYLKMIETQVTSGYFIPVSIDQHLKISNVFYADDVLLFGRATPSNVKAIIDVLDCFGDVSGLWINKSKSKIIFPPAMHHQFRRLITGACGIPGSTFFGNYLGLPLSANKLKVADFHFLLDKVKSRLQGWQGHYLNLAGKCTLIKSVLSALPAYIMQVVKLPSTVVDHLEKAMHLFLWSKSNSSRFLPRVSWEEVCKPLVVGGLGIRRLKDWNLAFLAKLAWRFLRDENRLWVRVLRAKYLKNQSFLSALVPYNSSHIWRVVLVGKEKLLEWLKVRIGNGSDTSLWFD*

Click here to download the sequence:
Link to NCBI Protein BLAST