Transcript Information: S_Transcript_115912.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value3E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.248859891048
Replicate 23.8968043893792
Replicate 32.8741926364053
Condition 2: 8 Hour
Replicate 13.6557811972228
Replicate 25.1135654033661
Replicate 34.5953645486064
Condition 3: 24 Hour
Replicate 15.9009555403163
Replicate 23.5320225833269
Replicate 35.3064560956218


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_115912.p1 GENE.S_Transcript_115912~~S_Transcript_115912.p1 ORF type:complete len:385 (+),score=47.15,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|1.8e-15,zf-RVT|PF13966.2|7.9e+03 S_Transcript_115912:247-1401(+)
ATGCAAGTCACACAGCTTCCTCAAACTGTAGTTGATCATCTTGAGAAATCCATGCGCCGTTTCCTGTGGAGTAAATCTAACTCCTCGCGTTTTATGGCCAGGGTTGGTTGGGATGTTATTTGTAAACCTCTAGCTATTGGGGGATTAGGGATTAGGCGTCTTAAGGACTGGAATTTAGCCTTCTTAGCTAAGCTATCATGGAGATTCTTAGCCGAGAAAAATAGACTCTGGGTTAAGGTTCTTAAGGCTCGTTACTTGAAAAGACAATCCTTCCTAAGTGCTATGCCTTCTTCCAACTCTTCTCATATCTGGAGGGTCATCCTTGCTGGTAAAGAAAAGCTCCTTGAGGGGCTGAAGGTGAGAATTGGTGATGGAATTGATACCTCCCTGTGGTACGACTGGTGGGTTGGGGAGAGACCACTTGTACAGTATATGCTTGGTGATGTTCCCTCCTCTATTGCCCATTGGCGCGTAGCGGATTTAATTGTGAATGGGTCCTGGAACTTGTCTAGGATCTCTCATCTCCTTCCCTATGATATTCTCCAAGCCATCCAATGTACTCCTCTCCCCCTCAGTCGGTCATGTCGAGACTCACTGAGATGGGGAATATCTGAACAAGGTACTATTTCTGTCAAATCTGTGTACAACCATCTCTCCACTTATGGGTTTGATTCCCCCTCTTCTGCTCCTTGGAAAAAAATCTGGAAGTTAAATATCCCAATGAAAATGCGTATGTTGATCTGGAGCTTGGTTCATAAAATTCTGCCCACTGCCGTCTTCCTTAGTGCTAGAATTCCAAATTTCAATCCTCAATGTCTCTCTTGCAACGACCCCACTGAAGATCTTCTTCATCTTTTTAGAGATTGCCCTATGGCCTCGCTGGTTTGGTCTTTCCTTCTTCAAGGTGATGCTTCTTTTGACTTTCACAGGTTCTTTCACTATGGTTGGGTGGAATGGCTCTCTTTCAACTTGAGCCTTGATAAGGACTGGTGCTCTAAATTTGCTATTATCTTATGGCATATCTGGTGTGCACGAAACAAGAGAATTTTTCAGGATATTACTATTGAACCCTCTTGGGTCTTCTCTTGCATTTGCCATGATTTTTCTCTTGTTTTTTCTTCTGAACAGATTGGCAAGCGCATGGTTACCTCGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_115912.p1 GENE.S_Transcript_115912~~S_Transcript_115912.p1 ORF type:complete len:385 (+),score=47.15,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|1.8e-15,zf-RVT|PF13966.2|7.9e+03 S_Transcript_115912:247-1401(+)
MQVTQLPQTVVDHLEKSMRRFLWSKSNSSRFMARVGWDVICKPLAIGGLGIRRLKDWNLAFLAKLSWRFLAEKNRLWVKVLKARYLKRQSFLSAMPSSNSSHIWRVILAGKEKLLEGLKVRIGDGIDTSLWYDWWVGERPLVQYMLGDVPSSIAHWRVADLIVNGSWNLSRISHLLPYDILQAIQCTPLPLSRSCRDSLRWGISEQGTISVKSVYNHLSTYGFDSPSSAPWKKIWKLNIPMKMRMLIWSLVHKILPTAVFLSARIPNFNPQCLSCNDPTEDLLHLFRDCPMASLVWSFLLQGDASFDFHRFFHYGWVEWLSFNLSLDKDWCSKFAIILWHIWCARNKRIFQDITIEPSWVFSCICHDFSLVFSSEQIGKRMVTS*

Click here to download the sequence:
Link to NCBI Protein BLAST