Transcript Information: S_Transcript_116065.p1


Annotated TAIR IDAT5G48240.3
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1665 (InterPro:IPR012459); Has 286 Blast hits to 283 proteins in 145 species: Archae - 0; Bacteria - 2; Metazoa - 103; Fungi - 97; Plants - 41; Viruses - 1; Other Eukaryotes - 42 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19559301-19561153 | Forward length=356
E-Value2E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2235862636865
Replicate 20
Replicate 31.0599273611265
Condition 2: 8 Hour
Replicate 11.2255971446628
Replicate 20
Replicate 30.24500974258599
Condition 3: 24 Hour
Replicate 10.50218122966883
Replicate 20.78151074401198
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_116065.p1 GENE.S_Transcript_116065~~S_Transcript_116065.p1 ORF type:internal len:87 (+),score=36.86 S_Transcript_116065:2-259(+)
GATGATGAGGATGAGGAGGAGACTATGCAAGAGGGTTCTGATGGAGAAATGGAGATGGAAGGGAATGATGGAATTAGAAGTGATGATGACGATATGGGGGAAGGAGGAAGTTCGGATGAAGAAGGTGGTGAAGTTGAAGTTCAAACTGGGGTTATGAAGTTTTTGGAAGGATGTAAAGCGTTTAGGGTGGCATTTCAATCGATCATGAAAACTCGTATTGATGATGAGACATTGGGTCCGGTATTGTCAGCAAAGAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_116065.p1 GENE.S_Transcript_116065~~S_Transcript_116065.p1 ORF type:internal len:87 (+),score=36.86 S_Transcript_116065:2-259(+)
DDEDEEETMQEGSDGEMEMEGNDGIRSDDDDMGEGGSSDEEGGEVEVQTGVMKFLEGCKAFRVAFQSIMKTRIDDETLGPVLSAKK

Click here to download the sequence:
Link to NCBI Protein BLAST