Transcript Information: S_Transcript_116068.p1


Annotated TAIR IDAT4G07960.1
Annotated Gene NameCellulose-synthase-like C12
Annotated Gene Symbol(s)ATCSLC12, CSLC12
Annotation TypeOrtholog
Chromosome Positionchr4:4802628-4805114 | Reverse length=699
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.4061647150512
Replicate 23.3823404525585
Replicate 32.2048278018369
Condition 2: 8 Hour
Replicate 11.5896563808833
Replicate 21.7305930733966
Replicate 32.1585668460741
Condition 3: 24 Hour
Replicate 12.5501059489723
Replicate 23.1557205992382
Replicate 33.440982148096


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_116068.p1 GENE.S_Transcript_116068~~S_Transcript_116068.p1 ORF type:complete len:711 (+),score=87.34,Glyco_tranf_2_3|PF13641.2|9.9e-33,Glyco_trans_2_3|PF13632.2|9.2e+02,Glyco_trans_2_3|PF13632.2|3.4e-22,Glyco_trans_2_3|PF13632.2|2.7e+03,Glyco_transf_21|PF13506.2|3.7e-14,Glycos_transf_2|PF00535.22|8.6e-14,Chitin_synth_2|PF03142.11|0.009,Chitin_synth_2|PF03142.11|0.58 S_Transcript_116068:358-2490(+)
ATGGCACCATGGTGGGGTGGTGGAGGGAGAATGAAGAAGGAGCAAAAGCACAGAGGGACACCAGTGGTGGTGAAAATGGAGAACCCCAACTGGTCCATTTATGAGATTAATGATCCCGATTATGAACAAGATGACGATGTTCACTTAGATAACGACACCAACAACAATAAATCCAAAATGCGAGGCAAGAACGCCAAGCAGCTGACGTGGGTTCTTCTCCTCAAGGCCCACAGAACCGCCGGCTGTCTTTCTTCCCTCGCCACAGCCATAGTCAGCCTCGCTTCCGCCATCCGCCGCCGTGTCAAGTCCGGCCGTACAGATTCCGATGACGCCTCCTCTTCCTCCGCCACTCGCCGCCGCTTGCACGGCTTCATCAGGATGTTCCTCGGTGTCTCCGTCGTTCTCCTCCTCCTCGAGCTCGCCGCCTACTTCAAAGGCTGGCATTTATTCGGGTCCCCAAGTGCCCAGTTGGCGTACATTATCGCCACCACCGGGTCGTTTGGGATTCGGGACCTGTTTGATATCATTTATATTAAGTGGGTTCATGTACGGGTCGGGTATCTTGCCCCGCCCCTCCAGTGGCTCGCCAATGTCTGTACGGTGCTTTTTCTCGTACAGACGTTGGACCGCCTTGTTCTTTGCTTGGGGTGCTTCTGGATCCGCCTTAAGCGGATCAAGCCCGTACCCAAGCTGGCCGGACTCGGGTCTGACCTTGAGTCCGGCCATGGGGACGGATACTTCCCCATGGTCCTCGTTCAGATCCCAATGTGCAACGAACGTGAGGTGTATCAGCAGTCAATAGCGGCTGTGTGCAGTTTGGATTGGCCGAAGTCGAAGTTGTTGATCCAAATTCTGGATGATTCGGATGATCCAACAACCCAAATGTTGATAAAGGAAGAGGTTCATAAATGGCAGGATGAAGGGGCCCATATTTTGTACCGGCATAGGGTAATTAGAGATGGGTACAAAGCTGGTAATCTCAAGTCTGCTATGAATTGTAGCTATGTCAAGGATTATGAATTTGTCGCCATTTTCGATGCCGATTTTCAACCTACCCCTGATTTCCTCAAACGTACCGTCATCCATTTCAAGGACAATGAAGAAGTGGGGTTAGTTCAAGCAAGATGGTCATTTGTGAACAAGGAAGAGAACCTATTAACAAGGCTACAGAACATAAACTTGGCATTCCACTTTGAAGTAGAGCAGCAAGTGAATGGGATATTCCTGAACTTCTTTGGGTTCAATGGGACGGCTGGTGTATGGAGAATTAAGGCGTTGGAAGAGTCGGGTGGGTGGTTGGAGAGGACCACCGTTGAGGATATGGACATTGCCGTGCGTGCTCATCTTAAAGGCTGGAAGTTTGTCTTCCTCAATGATGTTGAGTGTCAATGCGAGTTGCCAGAATCCTATGAAGCTTACAGGAAACAACAACATAGATGGCACTCGGGCCCTATGCAGTTATTTCGCCTTTGTTTACCTGATGTCATCAAGTCAAAGATATGCTTTTGGCAGAAAGCAAATTTGATTTTCCTGTTCTTTCTCTTGAGGAAGCTGATATTGCCCTTCTACTCTTTCACCCTCTTTTGCATTATCCTGCCTATGACCATGTTCATCCCTGAGGCAGAGCTCCCGGCTTGGGTTGTCTGCTACATTCCGGCCACCATGTCCTTCCTCAACATCCTCCCGGCCCCAAAGTCCTTCCCGTTCATTGTGCCATACCTCCTTTTTGAGAACACGATGTCGGTTACAAAGTTCAATGCCATGATATCCGGTTTGTTCCAATTGGGCAGTGCCTATGAGTGGGTTGTAACAAAAAAATCTGGTCGTTCATCTGAGGGTGATCTCGTCGCCCTTGTTGAGAAAGAGTCATTACACCAGAGGGGCGCTTCAGAATCTAGCTTAGGGGAAATGAAGGAGGAATTACATAAGCAGGAGCACAAGGGTTCTAAGAAGAAGAAGAAGAAGAGGCATAATAGGATTTACATGAAGGAACTGTCTCTAGCATTTCTTTTGTTGACTGCTGCAGCTCGTAGTCTTCTCTCAGCTCAGGGCATTCACTTCTACTTCTTACTCTTCCAAGGGATTTCGTTCTTGCTTGTTGGTCTTGACTTGATTGGTGAACAGGTTGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_116068.p1 GENE.S_Transcript_116068~~S_Transcript_116068.p1 ORF type:complete len:711 (+),score=87.34,Glyco_tranf_2_3|PF13641.2|9.9e-33,Glyco_trans_2_3|PF13632.2|9.2e+02,Glyco_trans_2_3|PF13632.2|3.4e-22,Glyco_trans_2_3|PF13632.2|2.7e+03,Glyco_transf_21|PF13506.2|3.7e-14,Glycos_transf_2|PF00535.22|8.6e-14,Chitin_synth_2|PF03142.11|0.009,Chitin_synth_2|PF03142.11|0.58 S_Transcript_116068:358-2490(+)
MAPWWGGGGRMKKEQKHRGTPVVVKMENPNWSIYEINDPDYEQDDDVHLDNDTNNNKSKMRGKNAKQLTWVLLLKAHRTAGCLSSLATAIVSLASAIRRRVKSGRTDSDDASSSSATRRRLHGFIRMFLGVSVVLLLLELAAYFKGWHLFGSPSAQLAYIIATTGSFGIRDLFDIIYIKWVHVRVGYLAPPLQWLANVCTVLFLVQTLDRLVLCLGCFWIRLKRIKPVPKLAGLGSDLESGHGDGYFPMVLVQIPMCNEREVYQQSIAAVCSLDWPKSKLLIQILDDSDDPTTQMLIKEEVHKWQDEGAHILYRHRVIRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPTPDFLKRTVIHFKDNEEVGLVQARWSFVNKEENLLTRLQNINLAFHFEVEQQVNGIFLNFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLKGWKFVFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDVIKSKICFWQKANLIFLFFLLRKLILPFYSFTLFCIILPMTMFIPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLVALVEKESLHQRGASESSLGEMKEELHKQEHKGSKKKKKKRHNRIYMKELSLAFLLLTAAARSLLSAQGIHFYFLLFQGISFLLVGLDLIGEQVD*

Click here to download the sequence:
Link to NCBI Protein BLAST