Transcript Information: S_Transcript_116129.p1


Annotated TAIR IDAT3G09660.1
Annotated Gene Nameminichromosome maintenance 8
Annotated Gene Symbol(s)MCM8
Annotation TypeOrtholog
Chromosome Positionchr3:2961314-2966166 | Reverse length=777
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.6630798973034
Replicate 26.3077688160519
Replicate 36.7655467878483
Condition 2: 8 Hour
Replicate 110.885414639685
Replicate 211.098306113703
Replicate 310.490958938744
Condition 3: 24 Hour
Replicate 17.1580492899989
Replicate 26.6571248102848
Replicate 37.9683221227651


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_116129.p1 GENE.S_Transcript_116129~~S_Transcript_116129.p1 ORF type:5prime_partial len:766 (+),score=143.32,MCM|PF00493.19|2.9e-123,MCM_N|PF14551.2|1.1e-08,MCM_N|PF14551.2|1.1e+03,MCM_N|PF14551.2|3.4e+03,Mg_chelatase|PF01078.17|1.8,Mg_chelatase|PF01078.17|2.6e-05,AAA_5|PF07728.10|3.8e-07,AAA_3|PF07726.7|5.1e-06 S_Transcript_116129:2-2299(+)
ACCTATTTCCCAGAAATCGAGCTCTCTTACCAAGATTGGCGAAATGTTCTCATCTCTAGGCTCGCTTGCTTCTTTGCCACTCCGCGTGCTCAACATTTCGTTTCTCAGGTAAAGAATGAAGATGGCATATTCTCTTTGCCACTCAACTTTCAAGAGTTCAGAAAGGTTTGTGAAATCGAATCTTTCTACGTGAATCTGAAAGAACAGCCAAAAGAAGCTCTCTTATGCATGGGTGCTGCTATTCATAAGGTGATGTCATTCCAGGAGAAGAGCAAATTAGAAGATCATATGAAGATAAATGTACGGCTGCATAATTATCCTGAATCTATGATTACTCTGAGGAATCTAAAAGCAGCTTATATCGACAGACTTGTATCTGTACATGGTACTGTTCTAAAGGTTAGCACTGCCAAACCATTGGTGGTTCAGATGACTTTTAAATGCATGCAGTGTGGAGCTGACATAAGATGCTCTTTTCCTGATGGAAAATATTCTCCTCCAACAACTTGTATTATGCGATGCTGCAAAGGCAAAACATTTGCACCAATAAGGTCCACCACAGAGTCAATTGATTTTCAGAAAATAAGATTGCAGGAGTTATTGAAGTCGGAGAACCATAAAGAAGGTCGGGTTCCTCGAACTGTAGAATGTGAACTTACTGAAGATCTTGTTGATGCTTGTATCCCCGGAGATGTGGTGACGGTGACTGGAATTATAAGACAAATTAACAATTACATGGACCTTGGAGGAGGCAAATCAAAAAGCAAGTATCAAGGATTATACTATTTATATCTGGAAGCAGTTTCTGTTACAAATTCCAAATCACAGTCCATTCCAGAGGATTCTCAATACTCCATTATTGATGCAAGAGCAACAGAGATGTCAGACTTATTGTCGTTTTCACCAAGGGATTTGGAATTCATTGTGAAGTTTTCTGAGGAACATGGTTCTGATATCTTTCGACAAATGATTCAGTCTATTTGTCCATCTATTTATGGTCATGAACTTGTTAAAGCGGGGATAACCTTGGCTCTTTTCGGTGGTGTGCGCAAGCATTCAATGGATCAGAACAAAGTACCTGTCAGAGGAGACATTCATGTGATTATAGTTGGTGATCCTGGACTGGGAAAGAGCCAACTACTTCAAGCTGCTGCTGCTGTATCTCCTCGTGGTATTTATGTCTGCGGCAATGCCACCACTAATGCTGGCCTTACAGTAGCTGTTGTCAAGGACCGTATGACAAGTGACTATGCTTTTGAAGCTGGTGCTGTTGTACTTGCAGACCGTGGACTGTGCTGTATTGATGAATTTGATAAGATGTCTGCAGAGCATCAGGCTCTGTTGGAAGCTATGGAGCAACAATGTGTGTCTGTTGCAAAGGCGGGGCTTGTTGCAAGTTTATCTGCACGCACTTCTGTCTTAGCTGCTGCAAACCCTGTCGGTGGTCATTACAACCGTGCAAAGACAGTGAATGAAAACCTGAAGATGAGTTCTGCTCTTCTTTCACGATTTGATTTGGTTTTCATATTGCTGGATAAACCTGATGAACATCTGGACAAAAGGGTCTCAGAGCACATTATGGCTCTTCATTCTGGTTGTGGAGATCATTCCCTGGCAGCTATGAAACTATGCACAGTATCACAAAGTACGGGACAAACAGATGTGAGTGCAAGAAGCAACTCGTTGGTTTCAAGATTGAGGTTAGATCCGAAGAATGACCGTGACTTTGTTCCACTACCTGCTCTACTTCTTCGAAAATATATTGCTTATGCAAGAAGTTTTGTCTTTCCACGGATGTCAAGGTCAGCAGCAGAAATCCTACAGAATTTCTATTTGCTGTTGAGAGATCGCAACGCTTCAGCTGATGGAACCCTCATAACTGCTAGGCAGCTAGAAAGTCTGGTAAGGCTGGCAGAAGCACGTGCTAGGGTAGACTTGAGAGATCAAATAACTGAGCAGGATGCTCTGGATGTTGTTGAAATCATGAAAGACTCCTTGTATGATAAGTATGTTGATGAACATGGAGTGATTGATTTTACCCGTAGTGGTGGCATGAGTCAGCAGAAGGAAGCGAAACGATTTTTAAATGCCCTGAATAAGCAATCAGAGCTGGATCAGAAAGATTGCTTTTCAATCTCCGAGATATACAGTTTGGCAGATAGGATTGGACTAAGAGTTCCAGACATTGATACATTTATTGATAACTTGAATAGTGTTGGTTTTTTAATTAAGAAAGGACCCAGAACATATCAGGTGCTCTCATCATCCCACTCAAGGAGTCAGTCAGTTAAAGTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_116129.p1 GENE.S_Transcript_116129~~S_Transcript_116129.p1 ORF type:5prime_partial len:766 (+),score=143.32,MCM|PF00493.19|2.9e-123,MCM_N|PF14551.2|1.1e-08,MCM_N|PF14551.2|1.1e+03,MCM_N|PF14551.2|3.4e+03,Mg_chelatase|PF01078.17|1.8,Mg_chelatase|PF01078.17|2.6e-05,AAA_5|PF07728.10|3.8e-07,AAA_3|PF07726.7|5.1e-06 S_Transcript_116129:2-2299(+)
TYFPEIELSYQDWRNVLISRLACFFATPRAQHFVSQVKNEDGIFSLPLNFQEFRKVCEIESFYVNLKEQPKEALLCMGAAIHKVMSFQEKSKLEDHMKINVRLHNYPESMITLRNLKAAYIDRLVSVHGTVLKVSTAKPLVVQMTFKCMQCGADIRCSFPDGKYSPPTTCIMRCCKGKTFAPIRSTTESIDFQKIRLQELLKSENHKEGRVPRTVECELTEDLVDACIPGDVVTVTGIIRQINNYMDLGGGKSKSKYQGLYYLYLEAVSVTNSKSQSIPEDSQYSIIDARATEMSDLLSFSPRDLEFIVKFSEEHGSDIFRQMIQSICPSIYGHELVKAGITLALFGGVRKHSMDQNKVPVRGDIHVIIVGDPGLGKSQLLQAAAAVSPRGIYVCGNATTNAGLTVAVVKDRMTSDYAFEAGAVVLADRGLCCIDEFDKMSAEHQALLEAMEQQCVSVAKAGLVASLSARTSVLAAANPVGGHYNRAKTVNENLKMSSALLSRFDLVFILLDKPDEHLDKRVSEHIMALHSGCGDHSLAAMKLCTVSQSTGQTDVSARSNSLVSRLRLDPKNDRDFVPLPALLLRKYIAYARSFVFPRMSRSAAEILQNFYLLLRDRNASADGTLITARQLESLVRLAEARARVDLRDQITEQDALDVVEIMKDSLYDKYVDEHGVIDFTRSGGMSQQKEAKRFLNALNKQSELDQKDCFSISEIYSLADRIGLRVPDIDTFIDNLNSVGFLIKKGPRTYQVLSSSHSRSQSVKV*

Click here to download the sequence:
Link to NCBI Protein BLAST