Transcript Information: S_Transcript_116180.p1


Annotated TAIR IDAT5G42740.1
Annotated Gene NameSugar isomerase (SIS) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:17136080-17140622 | Forward length=560
E-Value3.2E-54
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.77513595830623
Replicate 20.64260552109266
Replicate 30.53716707039613
Condition 2: 8 Hour
Replicate 11.4492983710673
Replicate 20.43440482795586
Replicate 30.41389995349478
Condition 3: 24 Hour
Replicate 10.42417249496299
Replicate 20.44007401119121
Replicate 31.224371087627


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_116180.p1 GENE.S_Transcript_116180~~S_Transcript_116180.p1 ORF type:5prime_partial len:103 (-),score=20.36,PGI|PF00342.15|5.1e-41 S_Transcript_116180:137-445(-)
GAGGGTGCCAAGCTCAAAGAAAAGATTAACCGAATGTATAATGGTGAACGTATTAATAGCACCGAGAATAGGTCTGTTCTTCATGTTGCTCTCCGTGCAGCAAGAGATGCTGTCATAAACAGTGATGGGAAAAATGTGGTCTCTGAGGTGTGGGTCGTTCTTGACAAGATACGGGATTTCTCCGAGAAAGTTCGAAGTGGTTCCTGGATTGGAGTCGCTGGGAAAGCTTTGAAGGATGTCATTGCAATTGGTATTGGGGGCAGTTTCTTAGGACCGTTGTTTGTGCACACAGCTCTCCAGACAGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_116180.p1 GENE.S_Transcript_116180~~S_Transcript_116180.p1 ORF type:5prime_partial len:103 (-),score=20.36,PGI|PF00342.15|5.1e-41 S_Transcript_116180:137-445(-)
EGAKLKEKINRMYNGERINSTENRSVLHVALRAARDAVINSDGKNVVSEVWVVLDKIRDFSEKVRSGSWIGVAGKALKDVIAIGIGGSFLGPLFVHTALQTG*

Click here to download the sequence:
Link to NCBI Protein BLAST