Transcript Information: S_Transcript_11619.p1


Annotated TAIR IDAT5G04430.2
Annotated Gene Namebinding to TOMV RNA 1L (long form)
Annotated Gene Symbol(s)BTR1, BTR1L
Annotation TypeOrtholog
Chromosome Positionchr5:1250602-1253523 | Reverse length=334
E-Value1.2E-110
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.106203000701
Replicate 28.4713664545732
Replicate 35.6806739835563
Condition 2: 8 Hour
Replicate 110.977627083081
Replicate 25.8525511209411
Replicate 36.5656408234753
Condition 3: 24 Hour
Replicate 15.3460052424239
Replicate 27.6502317557291
Replicate 37.9816596218722


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_11619.p1 GENE.S_Transcript_11619~~S_Transcript_11619.p1 ORF type:5prime_partial len:237 (+),score=57.05,KH_1|PF00013.25|2.7e-14,KH_1|PF00013.25|1.8e-13,KH_3|PF13014.2|5.1e+03,KH_3|PF13014.2|7e-08,KH_3|PF13014.2|1.9e-09,KH_2|PF07650.13|0.028,KH_2|PF07650.13|0.0012,KH_4|PF13083.2|0.0071,KH_4|PF13083.2|0.014 S_Transcript_11619:3-713(+)
CTGAAGGCAGTGGACCTTATCCTTAATAAACTGCTTACTGAGATCCAATCTGAAGATGGTGATGATGCTGAGCAAAGATCCAAAGTTCGACTTATAGTTCCGAACAGCTGTTGTGGTGCCATTATTGGCAAGAGTGGAGCAACCATCAAGTCATTTATTGAAGATTCTCGAGCTGGCATAAAGATATCTCCCCAAGACAACAATTATATTGGCTTGAGTGACCGGGTTGTGACACTGACAGGTTCTTTTGAGGAACAGATGCGTGCTATTGATCTGATTTTGTCAAAGCTAACTGAAGACCCCCTTTACTTGCAGTCAATGAATGCCCCACTTTCATATCCAGGTGTTTTGTTTGCTGGTTTTCACCGTGTGCCATATCCATATGTGCTTCCTCCAGTTGGAACAACAGCATACAACACAAACTATGGACCAAATGGGGTTGGAGGAAGATATCCGAATAATAAGGAAGATCGTAATAACTCTTTGACAATTGGTGTTGCTGATGAACATATTGGTGTGGTGGTTGGACGTGGTGGAAGGAACATACTGGAGATTAGTCAGGTTAGTGGAGCAAGGATAAAGATATCAGACAGGGGTGATTTCATGTCTGGTACATCAAACAGGAAAGTCACGATTACAGGGTCTCTTAGAGCAATACGAGCAGCTGAGGCCATGATTAATCAGAAGGTTGCCTCTGTTACGGAGAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_11619.p1 GENE.S_Transcript_11619~~S_Transcript_11619.p1 ORF type:5prime_partial len:237 (+),score=57.05,KH_1|PF00013.25|2.7e-14,KH_1|PF00013.25|1.8e-13,KH_3|PF13014.2|5.1e+03,KH_3|PF13014.2|7e-08,KH_3|PF13014.2|1.9e-09,KH_2|PF07650.13|0.028,KH_2|PF07650.13|0.0012,KH_4|PF13083.2|0.0071,KH_4|PF13083.2|0.014 S_Transcript_11619:3-713(+)
LKAVDLILNKLLTEIQSEDGDDAEQRSKVRLIVPNSCCGAIIGKSGATIKSFIEDSRAGIKISPQDNNYIGLSDRVVTLTGSFEEQMRAIDLILSKLTEDPLYLQSMNAPLSYPGVLFAGFHRVPYPYVLPPVGTTAYNTNYGPNGVGGRYPNNKEDRNNSLTIGVADEHIGVVVGRGGRNILEISQVSGARIKISDRGDFMSGTSNRKVTITGSLRAIRAAEAMINQKVASVTES*

Click here to download the sequence:
Link to NCBI Protein BLAST