Transcript Information: S_Transcript_116267.p1


Annotated TAIR IDAT1G52360.2
Annotated Gene NameCoatomer, beta' subunit
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:19499420-19505397 | Forward length=970
E-Value4.7E-138
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.243519351362
Replicate 23.5585144447604
Replicate 32.6501292319543
Condition 2: 8 Hour
Replicate 14.8779485182885
Replicate 23.5427560895755
Replicate 35.1258049959193
Condition 3: 24 Hour
Replicate 12.3062047086844
Replicate 21.9938837163942
Replicate 32.4408430069467


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_116267.p1 GENE.S_Transcript_116267~~S_Transcript_116267.p1 ORF type:5prime_partial len:341 (+),score=46.82,WD40|PF00400.28|21,WD40|PF00400.28|0.14,WD40|PF00400.28|4.4e-06,WD40|PF00400.28|0.017,WD40|PF00400.28|3.5e-05,WD40|PF00400.28|2.2e-05,BBS2_Mid|PF14783.2|39,BBS2_Mid|PF14783.2|5.6,BBS2_Mid|PF14783.2|1.2e+03,BBS2_Mid|PF14783.2|0.086 S_Transcript_116267:3-1025(+)
CCAATCTACCAGCTCTTATTAGGCAATCATTTAATTTCCATCTATTATCTCTTCTTCAAGCTTGCCAAAAGAAGTCACAAAGTTTTTCTACATTCGAAAAAAAAAAAGATGTCTCTCATTCGTGAATTTCAGGTTGAATTTATTCAAAAATCAGCAAGAGTGAAGTCATTGGATCTTCATCCACTACAACCATGGATTTTGGTTGGTCTATATTCAGGGAATGTGGAAGTATGGAATTACCAATCAAAGAAATTGGAGAAGTCTTTCGAGGTTTCAAGCAATGTCCCAGTGAGATCAGCAAAGTTTGTAGCAAGAAAGGGTTGGATTGTGACAGGAAGCGATGACAAGTTTATTCGAGTATATGACTATAACACTGAAGAAAAGGTTAAGGAATTTGAGGCACATGAAGATTACATTAGGTGCATTGTTGTTCATCCCACCCTTCCTCATGTACTATCGGCATCTGATGATAAACATATCAAACTTTGGGACTGGGAAAAGGAATGGATTTGTACTCAAACTTTTGAGGGACATTCCCACTATGTGATGCAAGTGGCTTTCCACCCAATTGACCATACAAATTTTGCAAGTGTATCTCTAGATTGTTCAATTAAGATTTGGAATCTCGGCAACTCAAACCCTGTGACAACAATAGATGCCCATGAAAAAGGAGTAAATTGTGTCAATTACTTCACTAATGAAGGCAAACTATATTTATTGACGGGTTCAGATGACTACACCACAAAGGTATGGGACTACCAATCATTGAGCTGCAATAAGGTGTTAGAAGGTCACACCAACAATGTTACCACCATACTCACTCATCCCGAGCTTCCTAATCTTATACTTACTGGTTCAGAAGATAAAAATGTTTATGTGTGGGATGCAGCCACTTCCAAGCTGGAGATGACCCTAGATCAAGGTCTTGGACGAGTATGGATTATTGAATTTGAGAAAACCACAAGCAAGTTTATTATTGGCTGTGATGAAGGATTTCTAATTGGGAAAATCGTCGGTGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_116267.p1 GENE.S_Transcript_116267~~S_Transcript_116267.p1 ORF type:5prime_partial len:341 (+),score=46.82,WD40|PF00400.28|21,WD40|PF00400.28|0.14,WD40|PF00400.28|4.4e-06,WD40|PF00400.28|0.017,WD40|PF00400.28|3.5e-05,WD40|PF00400.28|2.2e-05,BBS2_Mid|PF14783.2|39,BBS2_Mid|PF14783.2|5.6,BBS2_Mid|PF14783.2|1.2e+03,BBS2_Mid|PF14783.2|0.086 S_Transcript_116267:3-1025(+)
PIYQLLLGNHLISIYYLFFKLAKRSHKVFLHSKKKKMSLIREFQVEFIQKSARVKSLDLHPLQPWILVGLYSGNVEVWNYQSKKLEKSFEVSSNVPVRSAKFVARKGWIVTGSDDKFIRVYDYNTEEKVKEFEAHEDYIRCIVVHPTLPHVLSASDDKHIKLWDWEKEWICTQTFEGHSHYVMQVAFHPIDHTNFASVSLDCSIKIWNLGNSNPVTTIDAHEKGVNCVNYFTNEGKLYLLTGSDDYTTKVWDYQSLSCNKVLEGHTNNVTTILTHPELPNLILTGSEDKNVYVWDAATSKLEMTLDQGLGRVWIIEFEKTTSKFIIGCDEGFLIGKIVGA*

Click here to download the sequence:
Link to NCBI Protein BLAST