Transcript Information: S_Transcript_116393.p1


Annotated TAIR IDAT1G03770.2
Annotated Gene NameRING 1B
Annotated Gene Symbol(s)RING1B
Annotation TypeOrtholog
Chromosome Positionchr1:944772-947431 | Forward length=468
E-Value8.7E-105
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.9722804855539
Replicate 23.7005528132562
Replicate 34.6987862633377
Condition 2: 8 Hour
Replicate 17.1537402762357
Replicate 26.7923022409361
Replicate 37.5578483015539
Condition 3: 24 Hour
Replicate 13.2465856567762
Replicate 23.3682947141068
Replicate 33.5878492041248


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_116393.p1 GENE.S_Transcript_116393~~S_Transcript_116393.p1 ORF type:complete len:471 (+),score=97.06,zf-C3HC4|PF00097.21|2.7e-08,zf-RING_2|PF13639.2|1.7e-06,zf-C3HC4_2|PF13923.2|3.3e-06 S_Transcript_116393:263-1675(+)
ATGCCGGCTCAGAAGCTCTCTCATGATAACTCCGACGACGATCTCCCCGTAAACGACGCCGTTAACCTCCAAACCGACGATAACTCCGACAACGCCGAACAGCACCAAAACGACGATGAAGAACAACTAGAACAACAACAAGAAGGCGAGCAACAACCACAAGAGGATGAAGAACATGATGAAGAACGAGAAGAAGAAGATGAGAAAGAGGAGAAACAAGTTCAAACAGATCTCGATCAAAGTAGCTCATCGAGTAGCGATGACGGCAGCAACAGCGACATCAACACTAACAGCAAGAAGAAAGAGGAATTTATTGTTGTAAGACTCTCAGATATACGCAAGGAAGTACAATGTCCGATCTGTCTTGGGATCATCCGGAAGACAAGAACAGTTATGGAATGTCTGCATCGTTTCTGCAGAGAATGCATAGACAAATCCATGCGACTAGGGAACAACGAGTGCCCTGCTTGCCGTACTCATTGTGCAAGTCGGCGGTCTTTAAGAGATGATCCAAATTACGATTCTCTGATTGCTGCATTATATCCAGATATTGATCAGTATGAAGAAGAGGAGCTGGCTTTTCAGGAGGATGAAAGAGTCCGAAACAAGCAGATCCAAGCCGCTATTGCCCAAACCTTCCGCAGACAGACAGAAGCATTGACCCGGAAACGGAGAAGGTCACAAGGCAATTATCGAAAGAGAAGTAACTATAGATCTGAGGATGATGATGATGCTAATGGTCATGATGGTGGCAAAGATTCATCTTCTGCCGATGAACGTGGCACAGAGGCTAAACCTAAAAGACTAAAGAGGTGGAGAGGTCAGCCATCATCAGCAGCCGGTAGTGGAGATGGAGGTGGTGATGAAAATGATCAAGAGGTGCTCAGGGATTCTGGGATCGCCCCGGCAGGGTTGGTTGGAAGCTCAGAAATGCTTGCCTGGGGCAAAGGTGGCATTCGGAGCAACACTCGATATGGCAGTGGTAGTGGTCGTAGTGTTAAGCATGGCCGTAGCCGCCTTGGAAAGCTGAATGAACATCTTCGAAATTCGGATGAGAATGAAGATGAGTTGGATATTCATCTGGTGCTTGTTCCTCTTGATGAGCAGAAAGTGCCTGTTCTACGACACCCCTACTTGAGTGCCAGGCCCGCGTTATCTGTGGGACAATTGTGCGAGTTTGTAGCTATTCAGACCTCAGTGCCAACTGAAGCAGTTGAAATTTTGGCTGTAAAAGGTCTCTACTCCAAGTTGAGCGCTTTCACCCCTACCCAAGACATATCAAGTCCTTCGGTATTCAATTCATGTAAAGATGACTTGCAAGTGTTAGATCCAGAAGAAACTCTGGCAGGACTTAAAGCTGCATGCGATTTTTCTCAAGGACATTTGAAATTGGCTTACCGGCAAAGGTTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_116393.p1 GENE.S_Transcript_116393~~S_Transcript_116393.p1 ORF type:complete len:471 (+),score=97.06,zf-C3HC4|PF00097.21|2.7e-08,zf-RING_2|PF13639.2|1.7e-06,zf-C3HC4_2|PF13923.2|3.3e-06 S_Transcript_116393:263-1675(+)
MPAQKLSHDNSDDDLPVNDAVNLQTDDNSDNAEQHQNDDEEQLEQQQEGEQQPQEDEEHDEEREEEDEKEEKQVQTDLDQSSSSSSDDGSNSDINTNSKKKEEFIVVRLSDIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDSLIAALYPDIDQYEEEELAFQEDERVRNKQIQAAIAQTFRRQTEALTRKRRRSQGNYRKRSNYRSEDDDDANGHDGGKDSSSADERGTEAKPKRLKRWRGQPSSAAGSGDGGGDENDQEVLRDSGIAPAGLVGSSEMLAWGKGGIRSNTRYGSGSGRSVKHGRSRLGKLNEHLRNSDENEDELDIHLVLVPLDEQKVPVLRHPYLSARPALSVGQLCEFVAIQTSVPTEAVEILAVKGLYSKLSAFTPTQDISSPSVFNSCKDDLQVLDPEETLAGLKAACDFSQGHLKLAYRQRF*

Click here to download the sequence:
Link to NCBI Protein BLAST