Transcript Information: S_Transcript_116397.p1


Annotated TAIR IDAT2G21960.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56180.1); Has 224 Blast hits to 222 proteins in 59 species: Archae - 0; Bacteria - 65; Metazoa - 0; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:9354990-9356958 | Forward length=332
E-Value5.4E-171
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 138.117180443472
Replicate 241.137247388219
Replicate 344.326345515052
Condition 2: 8 Hour
Replicate 142.220585440549
Replicate 244.808169465735
Replicate 342.815982076865
Condition 3: 24 Hour
Replicate 141.108671237343
Replicate 246.307326823142
Replicate 346.373672422087


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_116397.p1 GENE.S_Transcript_116397~~S_Transcript_116397.p1 ORF type:complete len:347 (+),score=95.10 S_Transcript_116397:221-1261(+)
ATGTCAGTGGTTGCAGTCACTGGGGTTGGGCTTGTTTCTCTCCACCCACCTCATTGCAGAAATCTCCTCTTTCATGATCATCATGATATCAATTACCCATCATTATCCAGATTCAATAATGGGTCTGTTAAGAAACGGTTGAATTTTATCAGGTCATCATCTTCATCTTCTTCTTCTGTTGCTGTTCCTGCTGTTGATTTCAGCCCTCTTGAATCTGCCCTTGAAAAGAAGGACAGTGATGCTGTCAAGGAGGCACTTGATCAATTAAGTGAAGTTGGTTGGGCCAAAAAATGGAGTTCCCAGCCAAATGTTTCCCGTCGAACGACAACTCTTCGAGAGCTCACAACTCTTGGAATAAAGAATGCTGAGACGCTTGCTATCCCAAGTGTGAGAAATGATGTAGCTTTCCTATTTACGGTGGTTGGCACAACAGGATTCTTAGCTCTTCTTGCTGGTCAACTTCCAGGGGACTGGGGCTTCTTTGTGCCATACTTGATTGGAAGCATCTCTTTAGTGGTCTTGGCCGTGGGAAGCACTGCTCCAGGACTACTGCAGGCAGCCATCGGTGGGTTCTCATCAGTTTTTCCTGATTATCAAGAAAGGATTGCGCGACATGAAGCTGCTCACTTTTTAGTTGCGTATTTGCTTGGCTTGCCGATTTTAAATTATTCCCTTGATATTGGGAAAGAGCATGTAAACCTCATCAATGACAAGTTGGAGAAGCTTATATACAGCGGGCAGCTTGATGCCAAAGAGCTTGACAGGTTGGCTGTTGTGTCAATGGCTGGGTTGGCTGCTGAAGGGCTGACATATGACAAGGTGGTTGGTCAATCTGCTGATCTTTTCTCCCTTCAGAGATTTATAAACAGGAGTAAGCCACAACTCAGCAAAGAACAGCAGCAGAACCTAACTCGATGGGCTGTACTGTTCGCTGGATCTCTCTTGAAGAACAATAAAGCAGTTCATGAAGCTCTGATGGCTGCAATGTCAAATAAAGCAACCGTGCTCGAATGCATTAAAGCTATTGAAATGGCTTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_116397.p1 GENE.S_Transcript_116397~~S_Transcript_116397.p1 ORF type:complete len:347 (+),score=95.10 S_Transcript_116397:221-1261(+)
MSVVAVTGVGLVSLHPPHCRNLLFHDHHDINYPSLSRFNNGSVKKRLNFIRSSSSSSSSVAVPAVDFSPLESALEKKDSDAVKEALDQLSEVGWAKKWSSQPNVSRRTTTLRELTTLGIKNAETLAIPSVRNDVAFLFTVVGTTGFLALLAGQLPGDWGFFVPYLIGSISLVVLAVGSTAPGLLQAAIGGFSSVFPDYQERIARHEAAHFLVAYLLGLPILNYSLDIGKEHVNLINDKLEKLIYSGQLDAKELDRLAVVSMAGLAAEGLTYDKVVGQSADLFSLQRFINRSKPQLSKEQQQNLTRWAVLFAGSLLKNNKAVHEALMAAMSNKATVLECIKAIEMAS*

Click here to download the sequence:
Link to NCBI Protein BLAST