Transcript Information: S_Transcript_116407.p1


Annotated TAIR IDAT2G21960.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56180.1); Has 224 Blast hits to 222 proteins in 59 species: Archae - 0; Bacteria - 65; Metazoa - 0; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:9354990-9356958 | Forward length=332
E-Value2.7E-31
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.719125497503
Replicate 28.7331875331829
Replicate 316.521617741559
Condition 2: 8 Hour
Replicate 113.772647913148
Replicate 214.75920569982
Replicate 321.907954482898
Condition 3: 24 Hour
Replicate 114.866656819988
Replicate 217.312633843043
Replicate 314.012246891731


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_116407.p1 GENE.S_Transcript_116407~~S_Transcript_116407.p1 ORF type:internal len:144 (-),score=42.51 S_Transcript_116407:2-430(-)
CGCCAAAGCAAAGCTGAACCTTATCTGCCCTCTTACAGCAAAGTGCTGAGACAGGAGATCATGTCAGTTGTTGCAGTCATTGGTGTTGGGCTTGCTTCTCTCCGCCCACCTCATTGCAGAAATCTCCTCTTTCATGATCATCATGATATCAATTACCCATCATTATTCAATAATGGGTCTGTTAAGAACCGGTTGAATTTTATCAGGTCATCATCTTCATATTCTTCTTCTGCTGCTGTTCCTGCTGTTGATTTCAGCCCTCTTGAATCTGCCCTTGAAAAGAAGGACAGTGATGCTGTCAAGGAGGCACTTGATCAATTAAGTGAAGTTGGTTGGGCCCAAAAATGGAGTTCCCAGCCATATGTTTCCCGTCGAACGACAACTCTTCGAGAGCTCACAACTCTTGGAATAAAGAATGCTGAGACGCTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_116407.p1 GENE.S_Transcript_116407~~S_Transcript_116407.p1 ORF type:internal len:144 (-),score=42.51 S_Transcript_116407:2-430(-)
RQSKAEPYLPSYSKVLRQEIMSVVAVIGVGLASLRPPHCRNLLFHDHHDINYPSLFNNGSVKNRLNFIRSSSSYSSSAAVPAVDFSPLESALEKKDSDAVKEALDQLSEVGWAQKWSSQPYVSRRTTTLRELTTLGIKNAETL

Click here to download the sequence:
Link to NCBI Protein BLAST