Transcript Information: S_Transcript_116559.p2


Annotated TAIR ID
Annotated Gene Name
Annotated Gene Symbol(s)
Annotation Type
Chromosome Position
E-Value
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.61890700546931
Replicate 20.7696321938668
Replicate 30.857801678307
Condition 2: 8 Hour
Replicate 10.61992413712596
Replicate 21.0405510995222
Replicate 31.2392934654059
Condition 3: 24 Hour
Replicate 11.0160410925858
Replicate 20.39529903912234
Replicate 30.879838758318


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_116559.p2 GENE.S_Transcript_116559~~S_Transcript_116559.p2 ORF type:5prime_partial len:172 (+),score=27.61,Transposase_24|PF03004.10|3.3e-11 S_Transcript_116559:3-518(+)
TCGGTAGAAACATGGAAGGCATTTGTAACTATGAGGCTAAAAGACTCTTTCCAGGAGTTGAGTGAAGTAAATCGCAAAAGAGCTCTAATACCGAAGCATCCTTTCAGGAAAGCACGTACAGGTTATGCTGGCCTAAGACAGAAAATGGAGGAAAAGGCAGGCGGACCAATTTCTCGGGCATTATTGTGGAGAGAGGGACACACTAACAAAAGTGGTGATATTGTGGATGAATCTGTGAAAGAAGTGGTTAAAAAAATTGAATCCTTGTCAGAATCAGCATCTCGAGGCAAGATAGTGGATGATGGGTGGCAAGATGTCCTAGCACAAGCATTAGGAGTCCCAGAGTATGGAGGATGTGCAAGAGCTTTTGGTTTTAGTGTCTCTCAAGGTGATGCATTTTCTTCGAGAGCGCAAAACGTAGTGGAAACAGAGCTTGAGGTGGTATCCTTGAGAGGGTTGGTGAACACACTCAACATCAAATGCTTTGTATGTCGCGTCAAATGTCGGAGTTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_116559.p2 GENE.S_Transcript_116559~~S_Transcript_116559.p2 ORF type:5prime_partial len:172 (+),score=27.61,Transposase_24|PF03004.10|3.3e-11 S_Transcript_116559:3-518(+)
SVETWKAFVTMRLKDSFQELSEVNRKRALIPKHPFRKARTGYAGLRQKMEEKAGGPISRALLWREGHTNKSGDIVDESVKEVVKKIESLSESASRGKIVDDGWQDVLAQALGVPEYGGCARAFGFSVSQGDAFSSRAQNVVETELEVVSLRGLVNTLNIKCFVCRVKCRSC*

Click here to download the sequence:
Link to NCBI Protein BLAST