Transcript Information: S_Transcript_116568.p1


Annotated TAIR IDAT5G54530.1
Annotated Gene NameProtein of unknown function, DUF538
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:22152781-22154201 | Forward length=161
E-Value9.2E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 146.92292323045
Replicate 233.868317303203
Replicate 321.920971397613
Condition 2: 8 Hour
Replicate 145.456753044415
Replicate 243.173742988946
Replicate 355.346411325215
Condition 3: 24 Hour
Replicate 121.174207243076
Replicate 229.522596658663
Replicate 328.430111456644


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_116568.p1 GENE.S_Transcript_116568~~S_Transcript_116568.p1 ORF type:5prime_partial len:228 (+),score=27.91,DUF538|PF04398.8|1.7e-27 S_Transcript_116568:3-686(+)
CTCATCAGTCATCGGCTCCTCCATCAACCACAACAAAAGGGCAAAATGGTAAATTCACATATAAGAACTTCTTTTAAACTGTCTTTCTACATTCTCAACCTCTTCCCCAAACTCTCTCTCTTGCCTCCACCAAACCTCAAAAAAAAAAGTAACCCTTTTAAAACCAAAAAAAAAAAAAAAAAAAAAAAAATGGCTTCACAAACCCAAATCAAAAAATCTCTACTACTAATACTAACAATCTTGATATATTTTTGCACCCTTTGTTTATCATCACCAACAGTCCATGACCTCCTAAAGAAGAAAGGTTTACCAGCAGGGCTGCTCCCAAAAGAGGTAAAATCATTTGAATACAATGAAGAAAATGGGATTTTGGAAGTATTTCTTGATGGTCCATGTATGACAAAATTTGAGAACAGGGTAATATTTGAAAGTGTTGTAAGAGCTAATTTGAGCTATGGGGAGCTTATGGGTGTTGTTGGTTTGTCTCAAGAAGAACTCTTTATTTGGTTACCTGTTAAAGAAATTGCTGTAAATGACCCTAAATCTGGGATTATCTTGTTTGATATTGGTATGGCTCAAAAGCAATTCTCTTTGTCTCTCTTTGAAGATCCACCTAGTTGCAAGCCTCAAGAAGGACTTATAAATTACAATGGAAGGAAAGATAAAGGGTTTGGAATTCAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_116568.p1 GENE.S_Transcript_116568~~S_Transcript_116568.p1 ORF type:5prime_partial len:228 (+),score=27.91,DUF538|PF04398.8|1.7e-27 S_Transcript_116568:3-686(+)
LISHRLLHQPQQKGKMVNSHIRTSFKLSFYILNLFPKLSLLPPPNLKKKSNPFKTKKKKKKKKMASQTQIKKSLLLILTILIYFCTLCLSSPTVHDLLKKKGLPAGLLPKEVKSFEYNEENGILEVFLDGPCMTKFENRVIFESVVRANLSYGELMGVVGLSQEELFIWLPVKEIAVNDPKSGIILFDIGMAQKQFSLSLFEDPPSCKPQEGLINYNGRKDKGFGIQ*

Click here to download the sequence:
Link to NCBI Protein BLAST