Transcript Information: S_Transcript_116750.p1


Annotated TAIR IDAT5G38600.1
Annotated Gene NameProline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:15457386-15460466 | Forward length=532
E-Value2.2E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.8760864435395
Replicate 23.4835983511865
Replicate 35.4710508956136
Condition 2: 8 Hour
Replicate 16.7343337843578
Replicate 26.2084556033691
Replicate 35.7114232817175
Condition 3: 24 Hour
Replicate 14.7034438137643
Replicate 25.9641609411441
Replicate 34.1031077022677


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_116750.p1 GENE.S_Transcript_116750~~S_Transcript_116750.p1 ORF type:3prime_partial len:209 (-),score=43.12,RRM_1|PF00076.18|1.8e-08,RRM_5|PF13893.2|7e-06 S_Transcript_116750:2-625(-)
ATGGTTTATGACAAGGATACCAACAAACCCAAAGGCTATGCTTTCATTGAATATGCTCATACAAGGGACATGAAAGCTGCTTACAAGCAAGCTGATGGGAGGAAAATTGATGGGAGAAGGGTTCTGGTGGACGTAGAACGTGGAAGAACTGTTCCAAACTGGCGACCTCGCAGACTAGGTGGTGGACTTGGAACGACCAGGGTTGGAGGTGAAGATGTGAGTCAGAGGCATTCTACAAGGGAGCCACAATCAGGAGGGCCATCTCGTTCTGAGGAACCCAGGGTACGGGAAGATAGGGATAGAGAAAAATCCCGAGAAAGGGGCAGGGAGAGAGAAAGGGAACGGGAAAAATCTCGCGAGCGATCCCATGACAGGCCAAGGGACCGTGATTACAGAGAAGATAAGCACCATAGAGATCGTGATCGAACCAGAGACAGGGATAGGGAAAGAGACCGGGGCCGTGACCGTGACCGTGATCGTGATCGAACCAGAGACAGGGATAGGGAAAGAGACCGGGGCCGTGACCGTGACCGTGATCGTGATCGAACACGTGATCGTGATAGAGGTAGGGATCGTGGCCGTGACCATGACCGTGAAAGGGATCGAGATCGTGACCGTGATCGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_116750.p1 GENE.S_Transcript_116750~~S_Transcript_116750.p1 ORF type:3prime_partial len:209 (-),score=43.12,RRM_1|PF00076.18|1.8e-08,RRM_5|PF13893.2|7e-06 S_Transcript_116750:2-625(-)
MVYDKDTNKPKGYAFIEYAHTRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEDVSQRHSTREPQSGGPSRSEEPRVREDRDREKSRERGREREREREKSRERSHDRPRDRDYREDKHHRDRDRTRDRDRERDRGRDRDRDRDRTRDRDRERDRGRDRDRDRDRTRDRDRGRDRGRDHDRERDRDRDRDR

Click here to download the sequence:
Link to NCBI Protein BLAST