Transcript Information: S_Transcript_116769.p1


Annotated TAIR IDAT5G19730.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6670562-6673202 | Forward length=383
E-Value2E-126
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.1298202206687
Replicate 28.2951480320682
Replicate 34.526415644539
Condition 2: 8 Hour
Replicate 11.7817558489511
Replicate 21.4018912985729
Replicate 32.3931630470345
Condition 3: 24 Hour
Replicate 13.7073562059755
Replicate 27.1009331309705
Replicate 35.6634355583289


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_116769.p1 GENE.S_Transcript_116769~~S_Transcript_116769.p1 ORF type:complete len:383 (+),score=44.24,Pectinesterase|PF01095.15|1.2e-71 S_Transcript_116769:189-1337(+)
ATGTTAGGAAACTCAAGTATGATATTAGTAAAATTACTAGTACTACTACTAACTTCATTAATGTTGCAAAGTGTGTGTTCTTCTTCGTCGGTTCATCATGCTCAACAAAATGCAACCACAGTTTTTGAGAGAGATTTCCTGAAATGGGTTAACCATATTGGGTCAAAAACTCACAAGCACACTTGGGAATACCAGAAACAGAAAGCAGAGAACAAAATGAAGCCTTGCAAAACCCTCAGAGTGAGCAAAAAGAAGAATTGTTCATCATCTTCAGAGCATTTTGAAAGTGTGCAAAAGGCTATTGATTCACTTCCAACTGATAACTCGTGCCGAGTGGTCATTTCCATTGGTCCTGGGGAGTACAGGGAAAAGGTGGAGGTCCCGCGAACAATGGGTTATATTACACTTAAAGGAGCAGGGGCAGATAAGACCATAATTGAGTGGGATGACACTGCAGACAGGTTAGGAAAGGGCGGGCACCCATTAGGGACTTACGCCTCTGCCACTGTCGCTGTTAATTCTCCCTTCTTCATTGCCAAGAATATCACATTTAAGAATGTGGCACCACCGCCGCCATCAGGAGCATTAGGGAAGCAAGCAGTAGCACTGAGAATTACAGCAGATAGAGCAGCATTTGTAGGCTGCAAATTCATAGGGGCACAGGATACCCTATACGATCACACCGGGAGACATTACTTTAAGGACTGTTACATCCAGGGCTCAGTCGATTTTATATTTGGTAATGGTCTATCTCTCTATGACGGCTGCCATTTGCATGCTGTGACCAACACCTATGGTGCTTTAACAGCCCAAAAGAGGGAGAGCTTACTGGAGGAAACAGGGTTTTCATTTGTGAATTGCAAGATTACAGGGCAAGGTGTTCTCTACCTTGGGCGAGCTTGGGGAACCTTCTCTAGGGTCATCTTCGCTTACACTTACATGGACAAGATCATCATGCCTAGCGGCTGGTATGACTGGGGTGACAAGAGCAGGGATATGACCGTATTTTTTGGGCAATACAAGTGCTCAGGGCCGGGGGCTGATTATGGAAATAGGGTATCTTGGTCGAGGGAGCTGACTACAGAAGAAGCTAAACCATTCATTTCCCTTGACTTCATTGACGGCCATAATTGGCTCAAAAACTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_116769.p1 GENE.S_Transcript_116769~~S_Transcript_116769.p1 ORF type:complete len:383 (+),score=44.24,Pectinesterase|PF01095.15|1.2e-71 S_Transcript_116769:189-1337(+)
MLGNSSMILVKLLVLLLTSLMLQSVCSSSSVHHAQQNATTVFERDFLKWVNHIGSKTHKHTWEYQKQKAENKMKPCKTLRVSKKKNCSSSSEHFESVQKAIDSLPTDNSCRVVISIGPGEYREKVEVPRTMGYITLKGAGADKTIIEWDDTADRLGKGGHPLGTYASATVAVNSPFFIAKNITFKNVAPPPPSGALGKQAVALRITADRAAFVGCKFIGAQDTLYDHTGRHYFKDCYIQGSVDFIFGNGLSLYDGCHLHAVTNTYGALTAQKRESLLEETGFSFVNCKITGQGVLYLGRAWGTFSRVIFAYTYMDKIIMPSGWYDWGDKSRDMTVFFGQYKCSGPGADYGNRVSWSRELTTEEAKPFISLDFIDGHNWLKNL*

Click here to download the sequence:
Link to NCBI Protein BLAST