Transcript Information: S_Transcript_116847.p1


Annotated TAIR IDAT2G20000.1
Annotated Gene NameCDC27 family protein
Annotated Gene Symbol(s)HBT, CDC27b
Annotation TypeOrtholog
Chromosome Positionchr2:8632324-8636900 | Reverse length=744
E-Value5e-324
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1532643224419
Replicate 22.6497661289051
Replicate 32.9144652470924
Condition 2: 8 Hour
Replicate 12.9925642543638
Replicate 22.6020354928633
Replicate 33.1259650090744
Condition 3: 24 Hour
Replicate 12.2645770495938
Replicate 22.6646453560054
Replicate 32.3276981562244


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_116847.p1 GENE.S_Transcript_116847~~S_Transcript_116847.p1 ORF type:complete len:791 (+),score=153.45,TPR_1|PF00515.24|1e+03,TPR_1|PF00515.24|0.0021,TPR_1|PF00515.24|1.3e+03,TPR_1|PF00515.24|7e-08,TPR_1|PF00515.24|24,TPR_1|PF00515.24|3.4e-07,TPR_1|PF00515.24|37,TPR_1|PF00515.24|65,TPR_1|PF00515.24|0.013,TPR_2|PF07719.13|5.3e+03,TPR_2|PF07719.13|1.9e+03,TPR_2|PF07719.13|0.00012,TPR_2|PF07719.13|3.4e+03,TPR_2|PF07719.13|6.2,TPR_2|PF07719.13|0.00013,TPR_2|PF07719.13|1.7e+02,TPR_2|PF07719.13|1.2e-05,TPR_2|PF07719.13|22,TPR_2|PF07719.13|0.42,TPR_2|PF07719.13|2.4,TPR_11|PF13414.2|36,TPR_11|PF13414.2|0.0013,TPR_11|PF13414.2|1.2e+02,TPR_11|PF13414.2|1e-05,TPR_11|PF13414.2|5.2e-08,TPR_11|PF13414.2|0.00032,ANAPC3|PF12895.3|2.3e-16,ANAPC3|PF12895.3|2.3e+02,ANAPC3|PF12895.3|0.51,ANAPC3|PF12895.3|0.0017,ANAPC3|PF12895.3|0.029,TPR_12|PF13424.2|2.7e+02,TPR_12|PF13424.2|0.27,TPR_12|PF13424.2|0.35,TPR_12|PF13424.2|0.0021,TPR_12|PF13424.2|0.00031,TPR_12|PF13424.2|6.2e-07,TPR_12|PF13424.2|0.00088,TPR_8|PF13181.2|4.2e+03,TPR_8|PF13181.2|1.1e+03,TPR_8|PF13181.2|0.0022,TPR_8|PF13181.2|8.9e+02,TPR_8|PF13181.2|0.005,TPR_8|PF13181.2|3.6e+02,TPR_8|PF13181.2|0.0096,TPR_8|PF13181.2|74,TPR_8|PF13181.2|13,TPR_8|PF13181.2|0.029,TPR_19|PF14559.2|22,TPR_19|PF14559.2|68,TPR_19|PF14559.2|4.3e+02,TPR_19|PF14559.2|11,TPR_19|PF14559.2|4.2,TPR_19|PF14559.2|0.0075,TPR_19|PF14559.2|0.00048,TPR_19|PF14559.2|0.54,TPR_14|PF13428.2|6.5e+02,TPR_14|PF13428.2|4.5e+03,TPR_14|PF13428.2|0.58,TPR_14|PF13428.2|7.3e+03,TPR_14|PF13428.2|3.6,TPR_14|PF13428.2|80,TPR_14|PF13428.2|11,TPR_14|PF13428.2|6.8,TPR_14|PF13428.2|1.3e+02,TPR_14|PF13428.2|4.5e+02,TPR_16|PF13432.2|7.2e+03,TPR_16|PF13432.2|27,TPR_16|PF13432.2|1e+02,TPR_16|PF13432.2|6.7e+02,TPR_16|PF13432.2|35,TPR_16|PF13432.2|0.00098,TPR_16|PF13432.2|1.4,TPR_16|PF13432.2|17,TPR_10|PF13374.2|8.2,TPR_10|PF13374.2|1.2e+03,TPR_10|PF13374.2|1.2e+03,TPR_10|PF13374.2|2,TPR_10|PF13374.2|2e+02,TPR_10|PF13374.2|0.0095,TPR_10|PF13374.2|18,TPR_7|PF13176.2|6.2e+03,TPR_7|PF13176.2|0.86,TPR_7|PF13176.2|0.82,TPR_7|PF13176.2|1.1e+02,TPR_7|PF13176.2|42,TPR_7|PF13176.2|15,TPR_17|PF13431.2|1.6e+03,TPR_17|PF13431.2|4e+03,TPR_17|PF13431.2|8.1e+03,TPR_17|PF13431.2|15,TPR_17|PF13431.2|6.9e+03,TPR_17|PF13431.2|10,TPR_17|PF13431.2|0.71,TPR_17|PF13431.2|0.39,TPR_17|PF13431.2|2.9e+02,TPR_15|PF13429.2|1.2e+02,TPR_15|PF13429.2|7.8,TPR_15|PF13429.2|0.057,TPR_15|PF13429.2|2.2 S_Transcript_116847:292-2373(+)
ATGGCTCAATCCCGCTACCTTTTTGCTCTATCTTGCTTCCAGATGGGTCTTTTAGGTGAAGCAGAAAAAGCATTGTCCCCTACTCATGAGCCTGGTTTGGAGGTCCCGAATGGTGCGGCTGGGCATTATCTTCTTGGTCTCATTTATAGGTATACTGATAGAAGGAAGAGTGCTGTTAATCACTTCAAGCAGGCTTTGTCTGTGGACCCATTGTTTTGGGCTGCATTTGAGGAACTGTGTATATTGGGTTCTTCTGAAGAAGCAGCTGCAGTTTTTGGTGAAGCAGCTGTTCTTGCCATACAGAAGCAGCAACAACAGCAGCACCCATTAACTTCTCAGAACTTTGTTGCTTGCAGTGAAGATCTTAGTCAAGTTTCTGCTAAGGGTTTGGAAGATGCAAGTCCTAGACATCTGAAAAATTTCCACAGCAATAGTTTAAAAGATGCTCCTGGAAATTATCAGGGAAGTGTTGCATCTTCAGCTGCTATCAACCAACCTCCTAATTGCGCTCCTTCTAACTTGTCATATTACAATACGCCTTCACCCATGGCCTCTCAGTTGTCTGGCATAGCTCCACCACCTGTCGGTAGGAATGTACAGCAAAATACTGTGCCCACAAGCAATGAAAGCTCCCAAAGATCAACTGTAAAGACAACTCTTCAGGCCCCCCGAAGAAAGTTTGTGGATGAAGGAAAATTGCGGAAGATATCTGGTAGGTTATTTTCGGATTCTGGTCCTAGAAGAAGTACACGGCTTGCTGGGGAAGCTGGAGGAAACACCAACTCAATTACCACAACATCAACTGGGAATGGAACGAGTCACTCTACAAAATATTTGGGAAGTTCTAGGTTGAGCAATGCAGGGTCACGTTCTGTGACATTTCGTAAAGGACAGGCATGGGCAAGTGAAAGTTTTGAAGAAGGCGTTCACCATGAGGCATTTGATGACTCTCGTTTAAGCGCACAAGCAACAGTTAGTTTATCAACTTCGTGTGATGCTGGATCTGCTGAACAGGATGGTGGAGCTGTGAATTCAAGTAGGACAGCATGTGATGATTCTAGAGTTCACAATGCTGCCTTGGAAATTTTGGGCCTGTGGAGGCTCTTGGGTGAAGGCTTCAGACTTTCATGCCTGTACAAGTGTCAGGATGCACTAGATATCTATCAAAGACTTCCCCCTAAGCATTACAATACCGGTTGGGTGCTTTCCCAGGTTGGGAGAGCATACTTTGAATTAATTGATTATTTAGAAGCTGATCATGCCTTTAGGCTGGCTCGCCGCCTATGTCCTTATAGTTTAGATGGAATGGATGTCTACTCCACCGTACTTTATCATCTGAAGGAAGATATGAAACTAAGTTACCTGGCTCAGGAACTGCTGTCCACTGACCGCTTGGCCCCTCAAACATGGTGTGCCATGGGAAATTGCTACAGCTTGCAGAAAGACCACGATACAGCTTTGAAAAATTTCCAGCGAGCTGTACAGCTAAATTCAAGGTTTGCATATGCGCATACTCTCTGTGGTCATGAACATGTTGCTTTGGAAGATTTTGAGAGTGGAGTACGAAGCTTTCAAAGTGCCCTGAGTGTTGATTCAAGACACTACAATGCATGGTATGGTCTTGGAATGGTCTACCTTCGGCAAGAGAAGTTTGAATTTGCTGAACATCATTTCCGAACGGCGTTCCAGATCAACCCTCGCTCTTCTGTGATCATGTCATATCTTGGGACAGCTCTGCATGCTCTAAAGAGAAATGAGGAAGCTCTGATGATGATGGATAGGGCCATCGCGGCTGATAAAAAGAATCCTCTCCCGATGTATGAAACGGCTATTATATTGTCTAGCATGGACAACTATGAAGAAGCTCTACGGGTCCTGGAAGAGCTCAAGGAATATGCACCACGTGAATGCAGTATCTATGCCTTGATGGGTAAGATTTATAAGCGAAGGAACATGTATGATAAGGCAATGCTTCATTTTGGATTTGCCTTAGACTTGAAGCCATCAGCAACAGATGTTGCTACCATAAAGGCTGCTATTGAGAAATTGCATGTACCAGACGACTTAGATGACAGTTTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_116847.p1 GENE.S_Transcript_116847~~S_Transcript_116847.p1 ORF type:complete len:791 (+),score=153.45,TPR_1|PF00515.24|1e+03,TPR_1|PF00515.24|0.0021,TPR_1|PF00515.24|1.3e+03,TPR_1|PF00515.24|7e-08,TPR_1|PF00515.24|24,TPR_1|PF00515.24|3.4e-07,TPR_1|PF00515.24|37,TPR_1|PF00515.24|65,TPR_1|PF00515.24|0.013,TPR_2|PF07719.13|5.3e+03,TPR_2|PF07719.13|1.9e+03,TPR_2|PF07719.13|0.00012,TPR_2|PF07719.13|3.4e+03,TPR_2|PF07719.13|6.2,TPR_2|PF07719.13|0.00013,TPR_2|PF07719.13|1.7e+02,TPR_2|PF07719.13|1.2e-05,TPR_2|PF07719.13|22,TPR_2|PF07719.13|0.42,TPR_2|PF07719.13|2.4,TPR_11|PF13414.2|36,TPR_11|PF13414.2|0.0013,TPR_11|PF13414.2|1.2e+02,TPR_11|PF13414.2|1e-05,TPR_11|PF13414.2|5.2e-08,TPR_11|PF13414.2|0.00032,ANAPC3|PF12895.3|2.3e-16,ANAPC3|PF12895.3|2.3e+02,ANAPC3|PF12895.3|0.51,ANAPC3|PF12895.3|0.0017,ANAPC3|PF12895.3|0.029,TPR_12|PF13424.2|2.7e+02,TPR_12|PF13424.2|0.27,TPR_12|PF13424.2|0.35,TPR_12|PF13424.2|0.0021,TPR_12|PF13424.2|0.00031,TPR_12|PF13424.2|6.2e-07,TPR_12|PF13424.2|0.00088,TPR_8|PF13181.2|4.2e+03,TPR_8|PF13181.2|1.1e+03,TPR_8|PF13181.2|0.0022,TPR_8|PF13181.2|8.9e+02,TPR_8|PF13181.2|0.005,TPR_8|PF13181.2|3.6e+02,TPR_8|PF13181.2|0.0096,TPR_8|PF13181.2|74,TPR_8|PF13181.2|13,TPR_8|PF13181.2|0.029,TPR_19|PF14559.2|22,TPR_19|PF14559.2|68,TPR_19|PF14559.2|4.3e+02,TPR_19|PF14559.2|11,TPR_19|PF14559.2|4.2,TPR_19|PF14559.2|0.0075,TPR_19|PF14559.2|0.00048,TPR_19|PF14559.2|0.54,TPR_14|PF13428.2|6.5e+02,TPR_14|PF13428.2|4.5e+03,TPR_14|PF13428.2|0.58,TPR_14|PF13428.2|7.3e+03,TPR_14|PF13428.2|3.6,TPR_14|PF13428.2|80,TPR_14|PF13428.2|11,TPR_14|PF13428.2|6.8,TPR_14|PF13428.2|1.3e+02,TPR_14|PF13428.2|4.5e+02,TPR_16|PF13432.2|7.2e+03,TPR_16|PF13432.2|27,TPR_16|PF13432.2|1e+02,TPR_16|PF13432.2|6.7e+02,TPR_16|PF13432.2|35,TPR_16|PF13432.2|0.00098,TPR_16|PF13432.2|1.4,TPR_16|PF13432.2|17,TPR_10|PF13374.2|8.2,TPR_10|PF13374.2|1.2e+03,TPR_10|PF13374.2|1.2e+03,TPR_10|PF13374.2|2,TPR_10|PF13374.2|2e+02,TPR_10|PF13374.2|0.0095,TPR_10|PF13374.2|18,TPR_7|PF13176.2|6.2e+03,TPR_7|PF13176.2|0.86,TPR_7|PF13176.2|0.82,TPR_7|PF13176.2|1.1e+02,TPR_7|PF13176.2|42,TPR_7|PF13176.2|15,TPR_17|PF13431.2|1.6e+03,TPR_17|PF13431.2|4e+03,TPR_17|PF13431.2|8.1e+03,TPR_17|PF13431.2|15,TPR_17|PF13431.2|6.9e+03,TPR_17|PF13431.2|10,TPR_17|PF13431.2|0.71,TPR_17|PF13431.2|0.39,TPR_17|PF13431.2|2.9e+02,TPR_15|PF13429.2|1.2e+02,TPR_15|PF13429.2|7.8,TPR_15|PF13429.2|0.057,TPR_15|PF13429.2|2.2 S_Transcript_116847:292-2373(+)
MAQSRYLFALSCFQMGLLGEAEKALSPTHEPGLEVPNGAAGHYLLGLIYRYTDRRKSAVNHFKQALSVDPLFWAAFEELCILGSSEEAAAVFGEAAVLAIQKQQQQQHPLTSQNFVACSEDLSQVSAKGLEDASPRHLKNFHSNSLKDAPGNYQGSVASSAAINQPPNCAPSNLSYYNTPSPMASQLSGIAPPPVGRNVQQNTVPTSNESSQRSTVKTTLQAPRRKFVDEGKLRKISGRLFSDSGPRRSTRLAGEAGGNTNSITTTSTGNGTSHSTKYLGSSRLSNAGSRSVTFRKGQAWASESFEEGVHHEAFDDSRLSAQATVSLSTSCDAGSAEQDGGAVNSSRTACDDSRVHNAALEILGLWRLLGEGFRLSCLYKCQDALDIYQRLPPKHYNTGWVLSQVGRAYFELIDYLEADHAFRLARRLCPYSLDGMDVYSTVLYHLKEDMKLSYLAQELLSTDRLAPQTWCAMGNCYSLQKDHDTALKNFQRAVQLNSRFAYAHTLCGHEHVALEDFESGVRSFQSALSVDSRHYNAWYGLGMVYLRQEKFEFAEHHFRTAFQINPRSSVIMSYLGTALHALKRNEEALMMMDRAIAADKKNPLPMYETAIILSSMDNYEEALRVLEELKEYAPRECSIYALMGKIYKRRNMYDKAMLHFGFALDLKPSATDVATIKAAIEKLHVPDDLDDSL*

Click here to download the sequence:
Link to NCBI Protein BLAST