Transcript Information: S_Transcript_116940.p1


Annotated TAIR IDAT4G20910.1
Annotated Gene Namedouble-stranded RNA binding protein-related / DsRBD protein-related
Annotated Gene Symbol(s)HEN1, CRM2
Annotation TypeOrtholog
Chromosome Positionchr4:11186264-11190575 | Reverse length=942
E-Value2.5E-250
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.1378666066854
Replicate 27.1406538816853
Replicate 38.0926113727832
Condition 2: 8 Hour
Replicate 110.397233868312
Replicate 29.0276443162382
Replicate 39.685001297699
Condition 3: 24 Hour
Replicate 17.4553596145285
Replicate 27.828889268593
Replicate 38.2154791941976


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_116940.p1 GENE.S_Transcript_116940~~S_Transcript_116940.p1 ORF type:complete len:964 (+),score=192.34,Methyltransf_23|PF13489.2|2.4e+02,Methyltransf_23|PF13489.2|1.7e-05 S_Transcript_116940:256-3147(+)
ATGGAATCATCATCTTCTTCTTCTACTGTAATTCCAGTAAAAAATCCAACGTTAACCCCAAAGGCCGTAATACACCAGAAATACGGCAAGAAAGCATGCTACACAATAGAGGAAAAACAGGAACCCCCTGAAAATGATTGCCCAGGATTGGTTGTTCCTCCAAAGGGTGGTTCTTGTCTCTTCATTTGTCGTTTGCAGCTCCCTGAATTAACTGTTGTCTCACCCCCCTGTAAGAGGAAGAAGGAGGCTGAGCAATCTGCTTCACAAATGGCTTTGCAACAGCTAGGCATTGATTCCCGGAATACCAGTCCTACAGCATCAGATGCAGCAGAAGAATTGGTTTCTCGTCTGTCATATATCTTTTCAAATGAGTTTCTATCATCTCTTCATCCTCTGAGTAGTCACCTAAAAGCAATGCTCCGCAGAGAGGGTGAACTTAATGCGTCACTTCCTGTATCCACTCTCATTGCTTGTGATGCGAAGCTTGTAAATTTATGCAAATCCATCAATCCAATGATAGAGTCAAATCCTTTCTTGTACATCCCTCTTGTAATGAGAGCTGCTGTCAGATTGTCAGAACTCATTGTTATTTCAGAAGGAGAGCTATGGATCAGGAGGCACAAGCCTTACCCCTTGGATCTTATACCAACTGTAGTCAATGAACAGTCACATATGGCATGTGGGACCTGTATTAAGGCGGTATATATTTCACCTTCGCTTGGTAAGGATGTACAATCCATAAGTCTGAATTTGCATTCAAATAGTTATTATCTGGACGTCATTGCCCAAGAGCTTGGCGTTGTTGATGCTTCAAAGGTTCTCATCTCTAGGGCAATTGGTAAAGCTTCTTCTGAGATGAGACTATACTTTTCTGCTTTAGAGGCACAAAATTTGCATCCTGTGTTAGAGTTTTGTACTGCAAGAAAATTGTCTTCTGATGGCTCATTCAATGTACATGCTAGTTACTTGCTTGGCCAACACGTATATGGGAATGCAATACTAGCATCTATAGGCTACACATGGAGAGGTGCAGACCTCTTCAGTGAAGATGTATCTCTGCGTTCCTATTTCAGGATACTTGTTGGAAAAAAACCTGATGGGCTTTACAAATTGTCCAGAGAAGCAATTCTTCTAGCAGATTTGCCCACAGTATTCACCATTATAGCAAACTGGAGAGGCTCTTCACCAAAGGATCTCCTCTGTGCATTCTGCCGCCAACATCGGCTGTCTGAACCTGTGTTCAGTGTTGTATGTCAACCTTGTGAATCGAGTCAAGGGTCATCTAGATCATGCAAGAAAGTAGAAGCTGAAGGATCAAATATGAGAATTTTGACCGAAAAGGGAGGTGCATCTGCTGCAGATGGTAAAAATATGGTTGGGAAAGAAACTTTTAAATGTGATCTAAAAGTGTTTTCAAAGAATCAGGATTTGATTCTTCAAAGTTCTCCAAAAATATATTTCAAGAAACAAGGAGATGCAATTCAGGATGCTTCATTGAGAATTCTTTCATGTTTGAACTTGTACTTCAAGCAACCAAATATGCCTTTGGAGAAGCTGTCTTTTGCTGGCACTGATCTTGATGTTAAATGCAACCCGACTTGCTTCTTGAAGGAGTTCTCCATGTGTCAACTGATCCACAATGTTCAGCAATCAAGTGATGCACACGGAGGCAATAAACTAACCAGAAACCATGTAGATCCACAAAATAATATCATTGACCATGAAGATAAGCAGTTTTTCATAGAAGGGCCAGAACGTGGATCATCACCATCTAATGGGTGCCTTGTTTCTGTAAGGTACATTGTAACTTTGGTATCCAAAGGGAAAGAACTCCTTGATATTCTAGAGAGTAACGACGAGTTTGAATTTGAGATAGGCTCTGGAGCAGTGATTCCTTGCATTGAAGCAGCTCTCTTACAGATGACAGCAGGGCAATCTGTCTGCTTATCTATGGACTTGCCACCTTGGGAGTTAGTTTTGGCTGCAGCTATGGATTCTCATAAGGTTCTTTCGTATCTGTCCTCAAAAGCTTGTTGCTTGGAATACTCTATTACTCTATTGCGAGTAACAGAACCACTTGAAGACAGGATGGAGCAAGCTCTTTTCAGCCCTCCACTGTCAAAGCAGCGTGTGGAATATGCATTGCAATGGATCAAAGAATTTGCTGCTGCTTCTTTGATAGACTTTGGGTGTGGATCTGGAAGTTTGTTGGATTCTTTAGTGGGTTCTCCAAGCTCTTTGGAAAAGATCGTCGGTGTTGATATATCTCAGAAGGGTCTCATTCGTGCTGCTAAGATCCTGAGCTCAAAAGTCAAAAAGTTGGAGGAAATGATGCCTGCATCAAGGATAAAATCAGCAATTCTTTATGAGGGCAGCATAACTGTGTTTGATTCTCGCTTGTATGGATTTGACATGGGGACATGCTTAGAGGTAATTGAACATATGGAGGAAGACCAAGCATGTGTATTTGGTGATATTGCACTTGGATTATTTCGTCCGAAGGTCCTCATTGTTTCAACTCCAAATTATGAGTATAATGTCATACTGCAAGGCTCAAATCCATCAACCCAAGAGGAGGATCCAGATGAGAGGGCACAATTACAGACTTGTAAGTTCCGCAATCATGACCACAAGTTTGAATGGACAAGAGATCAATTTAGTTGCTGGGCAAGGGACTTAGCACTGAAGTACAGTTACAAGGTCGAGTTTGGAGGGGTTGGCGGAGTTCCTGGGGTCGAGCCAGGATTCGCTTCTCAGATAGCCGTTTTCAGGAGGGACCATGAGCAACATCAGCCTGTGAAAGGTTGTACGGAATGTATGGAGCCGGAACATCCCTACAAGATTATATGGGAATGGAATGCTGCTACCGCTACAGTCACAGAACTTGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_116940.p1 GENE.S_Transcript_116940~~S_Transcript_116940.p1 ORF type:complete len:964 (+),score=192.34,Methyltransf_23|PF13489.2|2.4e+02,Methyltransf_23|PF13489.2|1.7e-05 S_Transcript_116940:256-3147(+)
MESSSSSSTVIPVKNPTLTPKAVIHQKYGKKACYTIEEKQEPPENDCPGLVVPPKGGSCLFICRLQLPELTVVSPPCKRKKEAEQSASQMALQQLGIDSRNTSPTASDAAEELVSRLSYIFSNEFLSSLHPLSSHLKAMLRREGELNASLPVSTLIACDAKLVNLCKSINPMIESNPFLYIPLVMRAAVRLSELIVISEGELWIRRHKPYPLDLIPTVVNEQSHMACGTCIKAVYISPSLGKDVQSISLNLHSNSYYLDVIAQELGVVDASKVLISRAIGKASSEMRLYFSALEAQNLHPVLEFCTARKLSSDGSFNVHASYLLGQHVYGNAILASIGYTWRGADLFSEDVSLRSYFRILVGKKPDGLYKLSREAILLADLPTVFTIIANWRGSSPKDLLCAFCRQHRLSEPVFSVVCQPCESSQGSSRSCKKVEAEGSNMRILTEKGGASAADGKNMVGKETFKCDLKVFSKNQDLILQSSPKIYFKKQGDAIQDASLRILSCLNLYFKQPNMPLEKLSFAGTDLDVKCNPTCFLKEFSMCQLIHNVQQSSDAHGGNKLTRNHVDPQNNIIDHEDKQFFIEGPERGSSPSNGCLVSVRYIVTLVSKGKELLDILESNDEFEFEIGSGAVIPCIEAALLQMTAGQSVCLSMDLPPWELVLAAAMDSHKVLSYLSSKACCLEYSITLLRVTEPLEDRMEQALFSPPLSKQRVEYALQWIKEFAAASLIDFGCGSGSLLDSLVGSPSSLEKIVGVDISQKGLIRAAKILSSKVKKLEEMMPASRIKSAILYEGSITVFDSRLYGFDMGTCLEVIEHMEEDQACVFGDIALGLFRPKVLIVSTPNYEYNVILQGSNPSTQEEDPDERAQLQTCKFRNHDHKFEWTRDQFSCWARDLALKYSYKVEFGGVGGVPGVEPGFASQIAVFRRDHEQHQPVKGCTECMEPEHPYKIIWEWNAATATVTELE*

Click here to download the sequence:
Link to NCBI Protein BLAST