Transcript Information: S_Transcript_116967.p2


Annotated TAIR IDAT5G50350.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:20498697-20501611 | Reverse length=584
E-Value2E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.225818331537
Replicate 23.3428469026538
Replicate 33.4649989005553
Condition 2: 8 Hour
Replicate 12.8433853756177
Replicate 22.8473261905107
Replicate 31.1626825966354
Condition 3: 24 Hour
Replicate 13.3098308319082
Replicate 21.5109207717565
Replicate 33.6686610043805


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_116967.p2 GENE.S_Transcript_116967~~S_Transcript_116967.p2 ORF type:complete len:165 (+),score=32.05 S_Transcript_116967:1183-1677(+)
ATGATGCCATATGGAGAGATTGAAAATTTTAGGAGTCCAGTGAGGTCTGATTTGCTCCCTAGCGAGATGGATGGAGTTGTTCTCCCTTGGTTGAAGTGGGAGACTAGTAATGATGGCGCTATCCTTGGTAGTGATAATAAGCAACGTCCTGCAACTCCAAAAACTGTTCTACAAGATGCAATGAAGGATGCAACTGCTGAAGAAGATCTTGACCGAAGTGTCACTTCCAAGAGTAGTCGTGGGAGTTGGAGCCCTGGAGTTGTCAATAGCTTCTCTGTAGACACTCGAGAATTTAGCAGCGCTGTAGAGGTTGATAGCTGCAAAAGTCAACTTCTATCCCAAGTACCAAGAAGATCTCGAGTAGACATAGGCGAGTATCTAAAACCTCCAAGCAATGAAGATTTCCTTTCAGAACGATGGAAAAAGCGAGAAAGCTTAAACTCAGGTCGTCTCCTAATTTGTAACAGTGGTTCTCCGGGGACATTTTTTCTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_116967.p2 GENE.S_Transcript_116967~~S_Transcript_116967.p2 ORF type:complete len:165 (+),score=32.05 S_Transcript_116967:1183-1677(+)
MMPYGEIENFRSPVRSDLLPSEMDGVVLPWLKWETSNDGAILGSDNKQRPATPKTVLQDAMKDATAEEDLDRSVTSKSSRGSWSPGVVNSFSVDTREFSSAVEVDSCKSQLLSQVPRRSRVDIGEYLKPPSNEDFLSERWKKRESLNSGRLLICNSGSPGTFFL*

Click here to download the sequence:
Link to NCBI Protein BLAST