Transcript Information: S_Transcript_116969.p1


Annotated TAIR IDAT5G50350.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20498697-20501611 | Reverse length=584
E-Value1.4E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.9150137416324
Replicate 23.2299128856722
Replicate 33.1984024289127
Condition 2: 8 Hour
Replicate 11.7290857013892
Replicate 22.6705134637512
Replicate 32.8805199466191
Condition 3: 24 Hour
Replicate 13.247212410764
Replicate 23.8283465500587
Replicate 34.2604804738372


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_116969.p1 GENE.S_Transcript_116969~~S_Transcript_116969.p1 ORF type:5prime_partial len:444 (+),score=79.09 S_Transcript_116969:1-1332(+)
GCTACAGCAGCCTTCAGGTCCACCACAAGAAGGACCTCAATCGGCGACTCTTCTTCTTCTTCTTCTTCTTCATCTTCTTCGTCGAACCGAAACTCCTCATTCCACCGGAGGTCAAGGAGTGTCAGCCGTTTCTCTCACCGTATACTGCCAGACGACACGTCGGAGGACACCTCGGTGAATCGGAAGGGCAAATTCGTCAACACAGTAAGAGGTTCGGGTGTGCCGGAGATAAGCCTTGATGATCTGGCCATTGAGCTTTTCTCGTCTAGCGATTTCGGAGATAGTAGAGGTAGGCAGCAGAAGAAGGTGACGTCAGCTGACGTCAATGATGATACGACGTCTTGCAGAAGGAGAGGGAGGTCGGTTTCGAGGCGAGGTTCAAGAGTTGGTGAATTGAGAAATAATTTGAGTGACAAGAATGGCGGTAATAATATTAATGAGAGGGTTTCTGATGGAAATTCCAGGAGGAGGAGGTCGCTTTCGGTGGTTTCTCATTCTCGCCTAATTAGCGATTCTGAGAATGAACATTTTCTTAAAAACAGAAGCCGTGCCAACCCCAAAGATCTTAGCACTTGGAACAAAGAGAGACCTTCAGTGCAGAAACCAACAAATTCAAATCAACAGAGTGGATTACGGAGATGTTCTAGCCAGAAAGATTTCTTGAGATCAAACGATGGTTATTCTAGCTATGCCTCAACATTAACTGATGACGAAGGAATCGATGCACTTTATGGTGCTAATAGGGTTGAACCTGCAATAAGAGTTTCCTATGCACAACCTAAGGGTACTGCTGGAAATTGCGATGGTGTGCAGCCAACAGACTCTGACGTTCTTAAGGTTGTTTCTACTGTGAGGAAGAATTACAGGACAAAATTGGAACAGTCTGAAAAGCGTAAGCAAGAACTGCTTGCTGAAATATTGTTGGAGGAGGAGCGTGGTAATGAACTCAAAAAGATTGTTGGAGAATTGCGTTCCAGTCCTAAAGAAACTGCTGCTGCTAGAAGACTTATACGAGGCCGAAAGGATGTAACTGTTGAAGAAGATCTTGACCGAAGTGTCACTTCCAAGAGTAGTCGTGGGAGTTGGAGCCCTGGAGTTGTCAATAGCTTCTCTGTAGACACTCGAGAATTTAGCAGCGCTGTAGAGGTTGATAGCTGCAAAAGTCAACTTCTATCCCAAGTACCAAGAAGATCTCGAGTAGACATAGGCGAGTATCTAAAACCTCCAAGCAATGAAGATTTCCTTTCAGAACGATGGAAAAAGCGAGAAAGCTTAAACTCAGGTCGTCTCCTAATTTGTAACAGTGGTTCTCCGGGGACATTTTTTCTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_116969.p1 GENE.S_Transcript_116969~~S_Transcript_116969.p1 ORF type:5prime_partial len:444 (+),score=79.09 S_Transcript_116969:1-1332(+)
ATAAFRSTTRRTSIGDSSSSSSSSSSSSNRNSSFHRRSRSVSRFSHRILPDDTSEDTSVNRKGKFVNTVRGSGVPEISLDDLAIELFSSSDFGDSRGRQQKKVTSADVNDDTTSCRRRGRSVSRRGSRVGELRNNLSDKNGGNNINERVSDGNSRRRRSLSVVSHSRLISDSENEHFLKNRSRANPKDLSTWNKERPSVQKPTNSNQQSGLRRCSSQKDFLRSNDGYSSYASTLTDDEGIDALYGANRVEPAIRVSYAQPKGTAGNCDGVQPTDSDVLKVVSTVRKNYRTKLEQSEKRKQELLAEILLEEERGNELKKIVGELRSSPKETAAARRLIRGRKDVTVEEDLDRSVTSKSSRGSWSPGVVNSFSVDTREFSSAVEVDSCKSQLLSQVPRRSRVDIGEYLKPPSNEDFLSERWKKRESLNSGRLLICNSGSPGTFFL*

Click here to download the sequence:
Link to NCBI Protein BLAST