Transcript Information: S_Transcript_116970.p2


Annotated TAIR IDAT5G50350.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:20498697-20501611 | Reverse length=584
E-Value1E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 22.4215256831419
Replicate 31.5743799095757
Condition 2: 8 Hour
Replicate 10.52013147114959
Replicate 20
Replicate 30.51989872207272
Condition 3: 24 Hour
Replicate 10.79920305453393
Replicate 20
Replicate 31.2303436295179


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_116970.p2 GENE.S_Transcript_116970~~S_Transcript_116970.p2 ORF type:internal len:82 (-),score=22.54 S_Transcript_116970:3-245(-)
AATGAACTCAAAAAGATTGTTGGAGAATTGCGTTCCAGTCCTAAAGAAACTGCTGCTGCTAGAAGACTTATACGAGGCCGAAAGAGAAGTAAAGATAGAAACAAAGCGTCAAAGCAATTGGTTGAAGAGGCTGAAAAAATTATTGAAGACTTCATCTCTAGTGTTGAAGAGACAGACATCTCATCATTTGATGGTGAAAGGAGCGATACAAGTTCTGTTGTAGGAGGAACAATAAAACCATTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_116970.p2 GENE.S_Transcript_116970~~S_Transcript_116970.p2 ORF type:internal len:82 (-),score=22.54 S_Transcript_116970:3-245(-)
NELKKIVGELRSSPKETAAARRLIRGRKRSKDRNKASKQLVEEAEKIIEDFISSVEETDISSFDGERSDTSSVVGGTIKPL

Click here to download the sequence:
Link to NCBI Protein BLAST