Transcript Information: S_Transcript_116992.p2


Annotated TAIR IDAT3G31430.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18636.1); Has 295 Blast hits to 291 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 295; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:12795861-12796871 | Reverse length=336
E-Value1E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7305466532543
Replicate 22.0938324008889
Replicate 31.7826897796099
Condition 2: 8 Hour
Replicate 12.848382537965
Replicate 22.3983879912536
Replicate 32.4350265278098
Condition 3: 24 Hour
Replicate 12.1115440983878
Replicate 21.2745904577208
Replicate 31.6844247581624


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_116992.p2 GENE.S_Transcript_116992~~S_Transcript_116992.p2 ORF type:complete len:569 (+),score=115.89,DUF4283|PF14111.2|1.1e-24,zf-CCHC_4|PF14392.2|1.2e-12 S_Transcript_116992:250-1956(+)
ATGGCGGACTTACAAATGTGTCAATCCTCTGGAGAAGAAGATGAGATACTTAGAAATCTCCAACGGATGTATATTGCTCCTAAAGAAGAAAATGAGCTCCCTGCAAATGCCACTATTACTGGAAAAATCACCCGTTGTCTGGTAGGTAAGGTGATTTCGGATAACCCAATTAGAATGAAAGTGGCAAAAACTATTATTGAAAAAGGTTGGAATATCCAAAATTTTATGGAGGTTTCAATTCTGGGGGAAAACAAGTTTCTCTTCACCTTCACGAAGGCAGAGGAAAGAAGGAAGATCTTGGAGAGAGGATCCTGGAATGTGCTGGGGAAACTAATGGTGATCAAAGAGTGGGATCCGGATATCTGCCTAGAAGATGTGGATTTCACGAACGTCCATTTTTGGTTACAACTTCATGGACTTCACTGGTCCAAACTCTCAGCTGAAAATGCCATCCATATTGGCAAGCATTTTGGGGAAGTGACAGGGGTGGACGCAGTGTCTGAACAGAGACTCATTGCCAGGAGATTTCTGCGTACGAAGGTAACTCTTGATGTCACTAAACCTTTGCCTAGAGGTATTTTCTTAAAGGAAGGGGGTATATGGAAGTGGATTCAAGTCAAAATTGAACGTTTGGCGGATTTTTGCTATGCTTGTGGTACTTTGGGCCATGATAGTGAGGATTGTAGACTGAAATTTAAACCTAAATTCAATCCCCCAGAAACTGGGTATGATAATGGTCTTAGAGCGACTGAGCTTTCTGATATAAATGCTGGGTTTAAATCTACGGAGAATGTCTTAAAGGAATTGGTGGAGAGACAGGGAATGACTACTGAACCCGAGAATAGGGAAGGGGAGACTGAAGCTGGAAGAAGGGTGGAGGAAGAGGACAGGACAGTAAACATTGAACAACCGGAGGGGGTCACTGTTAATCTTCAGGATAGAAATGAGGGAGGTGATATTTCTAGGTCAATGGGGGAAAGGCTTGGTGAAGAGGGAGTAATGGTGAATACTCAAGGTGAAATAAGGGCTGATAGTTGTAGTCTTGGGAATCAAGAGGTTCCTGAATATGGTTATATTACTTCAGAGATGCTGATGACTTACTATAAAAGAAATGGGAGGATGGGAGTACCTGAGGTGAACAGGATTGAGGAGATCTCAGAATCAAAGAACGAGTCCTCCTTACAACCTATTCAAATTGTCTGGCCGGTGGAGGATTCCGAATCTCAGAGTAACTGCAATAGGGACCTTTCAGTGGTTCAAGTGAAGGACGATTTTAGCATGGATAATAGTAGTGCTCAGGCGGCAGATGTGGATGTTTTAATGGGACTTGAAGATGGGTTTGGGTCTTTCAGCTTACCTGAGAATGTTGATAGAAACCTGAGAAGGCTTGCGCTCAAGAGGAAAGGCACTATGGGGGATGAGCAAGGAGCTAAAGTCCAGAAGATAGAAAAAGGGAAGAGTGTGGTTATAAGGGAACATGATGGAAGTAGTGAAGAGGAGCGGTTTGAGGGCTGTGAGGATATGATGGTGAGGACAGAAAGAAAACACTGGTTCAAAGCCAAAAGAGGAAAACAACTGGATAAGAATTTTATTCAAGGTAAAGAGGAGTCGGACGAGGCACTGGTAGAAATGATGATTCAATTTGACCAAGAGTTCTTGAAGGCCGGGGAGGCGGGCCATTCCATGCCCCCAACCTCCAAATGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_116992.p2 GENE.S_Transcript_116992~~S_Transcript_116992.p2 ORF type:complete len:569 (+),score=115.89,DUF4283|PF14111.2|1.1e-24,zf-CCHC_4|PF14392.2|1.2e-12 S_Transcript_116992:250-1956(+)
MADLQMCQSSGEEDEILRNLQRMYIAPKEENELPANATITGKITRCLVGKVISDNPIRMKVAKTIIEKGWNIQNFMEVSILGENKFLFTFTKAEERRKILERGSWNVLGKLMVIKEWDPDICLEDVDFTNVHFWLQLHGLHWSKLSAENAIHIGKHFGEVTGVDAVSEQRLIARRFLRTKVTLDVTKPLPRGIFLKEGGIWKWIQVKIERLADFCYACGTLGHDSEDCRLKFKPKFNPPETGYDNGLRATELSDINAGFKSTENVLKELVERQGMTTEPENREGETEAGRRVEEEDRTVNIEQPEGVTVNLQDRNEGGDISRSMGERLGEEGVMVNTQGEIRADSCSLGNQEVPEYGYITSEMLMTYYKRNGRMGVPEVNRIEEISESKNESSLQPIQIVWPVEDSESQSNCNRDLSVVQVKDDFSMDNSSAQAADVDVLMGLEDGFGSFSLPENVDRNLRRLALKRKGTMGDEQGAKVQKIEKGKSVVIREHDGSSEEERFEGCEDMMVRTERKHWFKAKRGKQLDKNFIQGKEESDEALVEMMIQFDQEFLKAGEAGHSMPPTSKC*

Click here to download the sequence:
Link to NCBI Protein BLAST