Transcript Information: S_Transcript_117025.p1


Annotated TAIR IDAT5G59800.1
Annotated Gene Namemethyl-CPG-binding domain 7
Annotated Gene Symbol(s)MBD7, ATMBD7
Annotation TypeHomolog
Chromosome Positionchr5:24094752-24096422 | Reverse length=306
E-Value4E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2672857731038
Replicate 20.35020300884944
Replicate 31.4637092129842
Condition 2: 8 Hour
Replicate 10.84624564750528
Replicate 23.906195794238
Replicate 32.0300807242839
Condition 3: 24 Hour
Replicate 10
Replicate 21.2591006431304
Replicate 30.60052486678848


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_117025.p1 GENE.S_Transcript_117025~~S_Transcript_117025.p1 ORF type:5prime_partial len:126 (-),score=15.10,MBD|PF01429.15|8.6e-10 S_Transcript_117025:599-976(-)
CCTAGGAAAAAACAAACCAATTGTCTAGTGCCTTATCAAAATCCTGGTCCCTTCAGAAGAGTTGTATGTGGTGGGAAGTTTTTGAGGCAAGATGAGTTGGAAGAGGCGCGTCACAGTGAATTAGATGACATTGTCCCCGCCACATTACAACCCAGGTCACCTTCCTTGATTCCTGACGGCTGGATTGTGGAGGAGGTTCCACGGAAAGGTGGCCTGAGGTGTGACAGGTATTATATTGAGCCAGTAAGAGGTCAGAAATTCCGATCTGTACCAGAGGTTCAGAGATACTTGGCAGGAGAAAACTATAGATCTAGATGTAGGGCATTAACATTGTGCAATCATGCAACGGTGAGTAAAAACACTGAATACCTCTTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_117025.p1 GENE.S_Transcript_117025~~S_Transcript_117025.p1 ORF type:5prime_partial len:126 (-),score=15.10,MBD|PF01429.15|8.6e-10 S_Transcript_117025:599-976(-)
PRKKQTNCLVPYQNPGPFRRVVCGGKFLRQDELEEARHSELDDIVPATLQPRSPSLIPDGWIVEEVPRKGGLRCDRYYIEPVRGQKFRSVPEVQRYLAGENYRSRCRALTLCNHATVSKNTEYLF*

Click here to download the sequence:
Link to NCBI Protein BLAST