Transcript Information: S_Transcript_117026.p1


Annotated TAIR IDAT5G59800.1
Annotated Gene Namemethyl-CPG-binding domain 7
Annotated Gene Symbol(s)MBD7, ATMBD7
Annotation TypeOrtholog
Chromosome Positionchr5:24094752-24096422 | Reverse length=306
E-Value3.5E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.51675730553749
Replicate 20.53550460091055
Replicate 30.53716707039613
Condition 2: 8 Hour
Replicate 13.41620330323
Replicate 21.0860120698896
Replicate 32.8972996744635
Condition 3: 24 Hour
Replicate 11.4846037323705
Replicate 21.5402590391692
Replicate 31.4692453051524


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_117026.p1 GENE.S_Transcript_117026~~S_Transcript_117026.p1 ORF type:5prime_partial len:206 (-),score=35.95,MBD|PF01429.15|7.2e-10 S_Transcript_117026:269-886(-)
CCTAGGAAAAAACAAACCAATTGTCTAGTGCCTTATCAAAATCCTGGTCCCTTCAGAAGAGTTGTATGTGGTGGGAAGTTTTTGAGGCAAGATGAGTTGGAAGAGGCGCGTCACAGTGAATTAGATGACATTGTCCCCGCCACATTACAACCCAGGTCACCTTCCTTGATTCCTGACGGCTGGATTGTGGAGGAGGTTCCACGGAAAGGTGGCCTGAGGTGTGACAGGTATTATATTGAGCCAGTAAGAGGTCAGAAATTCCGATCTGTACCAGAGGTTCAGAGATACTTGGCAGGAGAAAACTATAGATCTAGATGTAGGGCATTAACATTGTGCAATCATGCAACGGGTCCACGTAGTCCAGCTCCACAGAGGAAAAAAACTTCAGTTAAGATGCCCAAGGACTCAATTTTCGATCTTACTAACCCTCCAGAAAAGGTTAATTGGATATTCAACAGTGATGGGAGAGAGAATTGGAGCCCCCTTGTAGAAGAAGGTGTGCTTCCTGATCATATAAAGGAACACTGGGCTGAAACATTCTTGCTCGGAATGAATGGATGGAAGCATCAAGTTCCACAGCTGACAATGAGCAATAATAATCAGGCAAAAAATGCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_117026.p1 GENE.S_Transcript_117026~~S_Transcript_117026.p1 ORF type:5prime_partial len:206 (-),score=35.95,MBD|PF01429.15|7.2e-10 S_Transcript_117026:269-886(-)
PRKKQTNCLVPYQNPGPFRRVVCGGKFLRQDELEEARHSELDDIVPATLQPRSPSLIPDGWIVEEVPRKGGLRCDRYYIEPVRGQKFRSVPEVQRYLAGENYRSRCRALTLCNHATGPRSPAPQRKKTSVKMPKDSIFDLTNPPEKVNWIFNSDGRENWSPLVEEGVLPDHIKEHWAETFLLGMNGWKHQVPQLTMSNNNQAKNA*

Click here to download the sequence:
Link to NCBI Protein BLAST