Transcript Information: S_Transcript_117129.p1


Annotated TAIR IDAT4G19010.1
Annotated Gene NameAMP-dependent synthetase and ligase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:10411715-10414221 | Reverse length=566
E-Value3E-114
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.97762045353724
Replicate 21.7109918432358
Replicate 32.4088471619397
Condition 2: 8 Hour
Replicate 11.0009877087634
Replicate 22.1002143620968
Replicate 31.3485536239886
Condition 3: 24 Hour
Replicate 10.31206976415135
Replicate 20.13875803005927
Replicate 30.72062984014617


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_117129.p1 GENE.S_Transcript_117129~~S_Transcript_117129.p1 ORF type:complete len:490 (+),score=78.78,AMP-binding|PF00501.24|2.5e-71 S_Transcript_117129:140-1609(+)
ATGGCACAATCTGTAATTTCTAGCGACCAACAACATAGCAGTTGCTTCTCTTGGTACTCCGAAGAAACAGGAATTTACAGTAGCAAACACCCAAACATTAAACTCCCAAATGACCCATTTCTTGATGTTGTTTCCCACATCTTTTCATACCCCAACAACAACAATGGTACAACTAACTCAGCTGCTGCCCTCATTGATGCCTCATCTGGGCATTCAATCCCTTACAATGACCTTTTTACCCTTGTTAAATCCACTGCCTTTGGCCTCCAACAAATGGGTATTTCTCAGGGTAATATGGTCTTGATTCTTTTGCCTAACTCAATATACTTTCCTATTCTTTCCCTGGGTGTTCTTTACTTGGGTGCAATTGTCACCCCTATGAACCCTCACTCAAGTTTTTCTGAGGTAAAACATCAAACACTCGGTAGTCATTTTACTCTAGCCTTTTCCCTTGCTGAAAATGCAAGCAAGTTGAGATCTTTAGGCCTTAGGGTAATTGAAGTACCAGAGAATGTGAGTTTTGTAGAAAAAAGTTGTGTTTTTTCCGAGTTTTATAAGCTTGTTTTTGGTAATGCTGGAAATTCTGTTTCAAGGCCTATAATAAAGCAAGATGATACAGCAACAATAATGTATTCTTCAGGTACTACAGGTGCTTGTAAAGGTGTTGTACTTACCCACAAGAACTTGATAGCAGTTGTGGAGCTTTTTGTTAGATTCGAAGCCTCACAATATAAAGAAAAAAGTTGGGAAAATGTTTACTTGGCTGTTTTGCCTATGTTCCATATATATGGGTTTGTTCTATTTGGTGTGGGTTTGTTGTCATTGGGTACTAGTATTGTTGTCATGAGGAAATTTGATATAAATGAGGTGGTGAAGGCAATTGAGTTTTATAAGGTTAGTCATTTTCCTGTTGTGCCACCTATATTGGCTGCATTAACTAGGAAAGCAAAAGGCCTTGGTGGTGAAAGTTGCTGGGGTAGCTTGAATCAGGTTTGTTGTGGGGCTGCTCCTTCATCAAACAAAGTCATTGCAGATTTTTTGGATGCTTTTCCTCATGTTGATTTCATTCAGGGGTATGGAATGACTGAGTCAACGGCAGTAGGAACTCGTGGATTCAATATAGGAAATTTACACAAGTACAGCTCAGTAGGTCTCCTAGCTCCAAATATGGAAGCGAAAGTGTTGAATTGGAATACTGGTATGAGCATGCCGCCTGGAAAGGCTGGAGAGCTCTTGCTTCGCGGACCTGGTGTTATGAAAGGTCACTATAATGGAGTATACTGTTTGATAGTAGATAATCTCATTATTTCCATTCTCAACAATTATATGCAGGAAACAAAACTTCTTAATGGCAATATTGTAAGCCTGCACAAGTCTTTTTTGATGCACTTAGATATGCCATCTGCAGATTTGCTGCATCTAAATGATTTTGCTAGGTCAAACCTGTTAATGCTCCTTGTGGCTGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_117129.p1 GENE.S_Transcript_117129~~S_Transcript_117129.p1 ORF type:complete len:490 (+),score=78.78,AMP-binding|PF00501.24|2.5e-71 S_Transcript_117129:140-1609(+)
MAQSVISSDQQHSSCFSWYSEETGIYSSKHPNIKLPNDPFLDVVSHIFSYPNNNNGTTNSAAALIDASSGHSIPYNDLFTLVKSTAFGLQQMGISQGNMVLILLPNSIYFPILSLGVLYLGAIVTPMNPHSSFSEVKHQTLGSHFTLAFSLAENASKLRSLGLRVIEVPENVSFVEKSCVFSEFYKLVFGNAGNSVSRPIIKQDDTATIMYSSGTTGACKGVVLTHKNLIAVVELFVRFEASQYKEKSWENVYLAVLPMFHIYGFVLFGVGLLSLGTSIVVMRKFDINEVVKAIEFYKVSHFPVVPPILAALTRKAKGLGGESCWGSLNQVCCGAAPSSNKVIADFLDAFPHVDFIQGYGMTESTAVGTRGFNIGNLHKYSSVGLLAPNMEAKVLNWNTGMSMPPGKAGELLLRGPGVMKGHYNGVYCLIVDNLIISILNNYMQETKLLNGNIVSLHKSFLMHLDMPSADLLHLNDFARSNLLMLLVAV*

Click here to download the sequence:
Link to NCBI Protein BLAST