Transcript Information: S_Transcript_117147.p1


Annotated TAIR IDAT1G54140.1
Annotated Gene NameTATA binding protein associated factor 21kDa subunit
Annotated Gene Symbol(s)TAFII21, TAF9
Annotation TypeOrtholog
Chromosome Positionchr1:20214076-20214869 | Reverse length=183
E-Value3E-90
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0394734017685
Replicate 20
Replicate 32.1406747239893
Condition 2: 8 Hour
Replicate 10.76162108275475
Replicate 20
Replicate 33.2354411543275
Condition 3: 24 Hour
Replicate 13.9983938531891
Replicate 20.60706638150931
Replicate 32.0267714254111


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_117147.p1 GENE.S_Transcript_117147~~S_Transcript_117147.p1 ORF type:5prime_partial len:224 (+),score=53.83,TFIID-31kDa|PF02291.11|1e-45,CENP-S|PF15630.2|3.4e-06 S_Transcript_117147:2-673(+)
ACCACGACCATCAGGACCTCAGCTTTGCAACTTTGGGGATTGGTTGAGATTTTCATCGTGAAGGCTCTTGTGTGTCAAGATGACCCGAAAGGGCTCCCAAAGCCCCCTGATGTCCACAACTCATCCTTTAAGGATAGAAGGGTGATGGCAGAAGGAGAAGAAGACTTGCCCCGGGATGCCAAGATTGTGAAATCATTGTTAAAGTCAATGGGTGTAGAGGAGTATGAACCTCGTGTTGTGCACCAGTTTCTGGAGCTTTGGTATCGATATGTTGTTGATGTATTGACGGATGCACAAGTCTACTCAGAGCATGCTGGCAAAGGCACAATCGATTGTGATGATATTAAGCTTGCAATTCAATCGAAAGTGAATTTCAGCTTCTCACAACCACCTCCTCGTGAGGTCCTACTAGAGCTGGCTAGAAACAGGAATAAAACTCCATTGCCGAAGAGTCTTGGAGGCCCCGGGATACCCCTTCCACCTGAAGAAGACACGTTGATCAGCCCGAACTACCAGCTTGTGATACCAAAGAAGCAGCCACCCCAGGCAACGGAAGAAACCGAGGAAGAAGAGGCTGCTGCCCCTAGCTCGTCCCAAGAGCCAAAGGGTGATTTGGGCCAACATACTCCACAGAGGGTTTCTTTCCCTCTTGGAGCAAAGCGTCCCAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_117147.p1 GENE.S_Transcript_117147~~S_Transcript_117147.p1 ORF type:5prime_partial len:224 (+),score=53.83,TFIID-31kDa|PF02291.11|1e-45,CENP-S|PF15630.2|3.4e-06 S_Transcript_117147:2-673(+)
TTTIRTSALQLWGLVEIFIVKALVCQDDPKGLPKPPDVHNSSFKDRRVMAEGEEDLPRDAKIVKSLLKSMGVEEYEPRVVHQFLELWYRYVVDVLTDAQVYSEHAGKGTIDCDDIKLAIQSKVNFSFSQPPPREVLLELARNRNKTPLPKSLGGPGIPLPPEEDTLISPNYQLVIPKKQPPQATEETEEEEAAAPSSSQEPKGDLGQHTPQRVSFPLGAKRPK*

Click here to download the sequence:
Link to NCBI Protein BLAST