Transcript Information: S_Transcript_117148.p1


Annotated TAIR IDAT1G54140.1
Annotated Gene NameTATA binding protein associated factor 21kDa subunit
Annotated Gene Symbol(s)TAFII21, TAF9
Annotation TypeOrtholog
Chromosome Positionchr1:20214076-20214869 | Reverse length=183
E-Value1.6E-89
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 122.087713575757
Replicate 218.847160310266
Replicate 316.128060704687
Condition 2: 8 Hour
Replicate 127.196347975291
Replicate 227.896880085165
Replicate 322.437734321033
Condition 3: 24 Hour
Replicate 113.619886872678
Replicate 218.167751789947
Replicate 316.746620576676


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_117148.p1 GENE.S_Transcript_117148~~S_Transcript_117148.p1 ORF type:5prime_partial len:247 (+),score=41.03,TFIID-31kDa|PF02291.11|1.3e-45,CENP-S|PF15630.2|4e-06 S_Transcript_117148:2-742(+)
TCAAAACTCCCCCAGCCCCTGCGAAAGCCTTCAAATTCAATTTCTCTTTCCTTCGCTTATCTCTGTCAGACTATCCTTCACCGGCCATCGAACGGTCGGACGTTCCCCAGTCTCCAGGCCCCGCCCTACTTCCGGTCTCGGCGTCCCACGGTCCGGCTGCTCAGTCTTCACGAATCAGGACCACGACCATCAGGACCTCAGGATAGAAGGGTGATGGCAGAAGGAGAAGAAGACTTGCCCCGGGATGCCAAGATTGTGAAATCATTGTTAAAGTCAATGGGTGTAGAGGAGTATGAACCTCGTGTTGTGCACCAGTTTCTGGAGCTTTGGTATCGATATGTTGTTGATGTATTGACGGATGCACAAGTCTACTCAGAGCATGCTGGCAAAGGCACAATCGATTGTGATGATATTAAGCTTGCAATTCAATCGAAAGTGAATTTCAGCTTCTCACAACCACCTCCTCGTGAGGTCCTACTAGAGCTGGCTAGAAACAGGAATAAAACTCCATTGCCGAAGAGTCTTGGAGGCCCCGGGATACCCCTTCCACCTGAAGAAGACACGTTGATCAGCCCGAACTACCAGCTTGTGATACCAAAGAAGCAGCCACCCCAGGCAACGGAAGAAACCGAGGAAGAAGAGGCTGCTGCCCCTAGCTCGTCCCAAGAGCCAAAGGGTGATTTGGGCCAACATACTCCACAGAGGGTTTCTTTCCCTCTTGGAGCAAAGCGTCCCAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_117148.p1 GENE.S_Transcript_117148~~S_Transcript_117148.p1 ORF type:5prime_partial len:247 (+),score=41.03,TFIID-31kDa|PF02291.11|1.3e-45,CENP-S|PF15630.2|4e-06 S_Transcript_117148:2-742(+)
SKLPQPLRKPSNSISLSFAYLCQTILHRPSNGRTFPSLQAPPYFRSRRPTVRLLSLHESGPRPSGPQDRRVMAEGEEDLPRDAKIVKSLLKSMGVEEYEPRVVHQFLELWYRYVVDVLTDAQVYSEHAGKGTIDCDDIKLAIQSKVNFSFSQPPPREVLLELARNRNKTPLPKSLGGPGIPLPPEEDTLISPNYQLVIPKKQPPQATEETEEEEAAAPSSSQEPKGDLGQHTPQRVSFPLGAKRPK*

Click here to download the sequence:
Link to NCBI Protein BLAST