Transcript Information: S_Transcript_117149.p1


Annotated TAIR IDAT1G54140.1
Annotated Gene NameTATA binding protein associated factor 21kDa subunit
Annotated Gene Symbol(s)TAFII21, TAF9
Annotation TypeOrtholog
Chromosome Positionchr1:20214076-20214869 | Reverse length=183
E-Value8.4E-52
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.28285627637839
Replicate 30.3546680016077
Condition 2: 8 Hour
Replicate 10.41010365994486
Replicate 20
Replicate 30.13664004874988
Condition 3: 24 Hour
Replicate 10.28006260885377
Replicate 20.43584253031437
Replicate 30.16167977182767


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_117149.p1 GENE.S_Transcript_117149~~S_Transcript_117149.p1 ORF type:internal len:156 (+),score=22.83,TFIID-31kDa|PF02291.11|9.3e-31,CENP-S|PF15630.2|1.5e-06 S_Transcript_117149:3-467(+)
ACAATTGCCCCTGCAAAAGCCTTCAAATTCAATCTCTCTCTCCTTCGCTTCTCTCTCTCAGACTCTCTCCTTCACTGGCCATCGAGCGGTCGGACGTTCCCCAGTCCCCAGGCCCTGCCCTACGTCCGGTCTCGGCGTCCCACGGTCCGGCTGCTCAGTCTTCACGAATCAGGACCACGACCACCAGGACCTCAGGGTAGAAGGGTGATGGCAGGAGGAGAAGAAGACTTGCCCCGGGATGCCAAGATTGTGAAATCATTGTTAAAGTCAATGGGTGTAGAGGAGTATGAACCTCGTGTTGTGCACCAGTTTCTGGAGCTTTGGTATCGATATGTTGTTGATGTATTGACGGATGCACAAGTCTACTCAGAGCATGCTGGCAAAGGCACAATCGATTGTGATGATATTAAGCTTGCAATTCAATCGAAAGTGAATTTCAGCTTCTCACAACCACCTCCTCGTGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_117149.p1 GENE.S_Transcript_117149~~S_Transcript_117149.p1 ORF type:internal len:156 (+),score=22.83,TFIID-31kDa|PF02291.11|9.3e-31,CENP-S|PF15630.2|1.5e-06 S_Transcript_117149:3-467(+)
TIAPAKAFKFNLSLLRFSLSDSLLHWPSSGRTFPSPQALPYVRSRRPTVRLLSLHESGPRPPGPQGRRVMAGGEEDLPRDAKIVKSLLKSMGVEEYEPRVVHQFLELWYRYVVDVLTDAQVYSEHAGKGTIDCDDIKLAIQSKVNFSFSQPPPRE

Click here to download the sequence:
Link to NCBI Protein BLAST