Transcript Information: S_Transcript_117150.p1


Annotated TAIR IDAT1G54140.1
Annotated Gene NameTATA binding protein associated factor 21kDa subunit
Annotated Gene Symbol(s)TAFII21, TAF9
Annotation TypeOrtholog
Chromosome Positionchr1:20214076-20214869 | Reverse length=183
E-Value4E-89
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.8209636282979
Replicate 28.1947504070769
Replicate 37.0007120643871
Condition 2: 8 Hour
Replicate 110.967343591668
Replicate 28.4921711163044
Replicate 39.3093701785021
Condition 3: 24 Hour
Replicate 16.6872092318145
Replicate 26.1053533226079
Replicate 36.8974570413991


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_117150.p1 GENE.S_Transcript_117150~~S_Transcript_117150.p1 ORF type:5prime_partial len:245 (+),score=42.34,TFIID-31kDa|PF02291.11|1.3e-45,CENP-S|PF15630.2|4e-06 S_Transcript_117150:2-736(+)
AACAATTGCCCCTGCAAAAGCCTTCAAATTCAATCTCTCTCTCCTTCGCTTCTCTCTCTCAGAATCTGTCCTTCACCGGCCATCGAACGTTGGACGTTCCCCAGTACCCAGGCCCCGCCCTACGTCCGGTCTCGGCATCCCACGGTCCGGCTTCTCAGTCTTCACGAATCAGGACCACGACCACCAGGACCTCAGGGTAGAAGGGTGATGGCAGGAGGAGAAGAAGACTTGCCCCGGGATGCCAAGATTGTGAAATCATTGTTAAAGTCAATGGGTGTAGAGGAGTATGAACCTCGTGTTGTGCACCAGTTTCTGGAGCTTTGGTATCGATATGTTGTTGATGTATTGACGGATGCACAAGTCTACTCAGAGCATGCTGGCAAAGGCACAATCGATTGTGATGATATTAAGCTTGCAATTCAATCGAAAGTGAATTTCAGCTTCTCACAACCACCTCCTCGTGAGGTCCTACTAGAGCTGGCTAGAAACAGGAATAAAACTCCATTGCCGAAGAGTCTTGGAGGCCCCGGGATACCCCTTCCACCAGAAGAAGACACGTTGGTCAGCCCGAACTACCAACTTGTGATACCAAAGAAGCAGGCACCCCAGGCAATGGAAGAAACCGAGGAAGAAGAGGCTGCTGCCCCTAGCTCGTCCCAAGAGCCAAAGGGTGATTTGGGCCAACATACTCCACAGAGGGTTTCTTTCCCTCTTGGAGCAAAGCGTCCCAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_117150.p1 GENE.S_Transcript_117150~~S_Transcript_117150.p1 ORF type:5prime_partial len:245 (+),score=42.34,TFIID-31kDa|PF02291.11|1.3e-45,CENP-S|PF15630.2|4e-06 S_Transcript_117150:2-736(+)
NNCPCKSLQIQSLSPSLLSLRICPSPAIERWTFPSTQAPPYVRSRHPTVRLLSLHESGPRPPGPQGRRVMAGGEEDLPRDAKIVKSLLKSMGVEEYEPRVVHQFLELWYRYVVDVLTDAQVYSEHAGKGTIDCDDIKLAIQSKVNFSFSQPPPREVLLELARNRNKTPLPKSLGGPGIPLPPEEDTLVSPNYQLVIPKKQAPQAMEETEEEEAAAPSSSQEPKGDLGQHTPQRVSFPLGAKRPK*

Click here to download the sequence:
Link to NCBI Protein BLAST