Transcript Information: S_Transcript_117152.p1


Annotated TAIR IDAT1G54140.1
Annotated Gene NameTATA binding protein associated factor 21kDa subunit
Annotated Gene Symbol(s)TAFII21, TAF9
Annotation TypeOrtholog
Chromosome Positionchr1:20214076-20214869 | Reverse length=183
E-Value3.2E-53
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.4712610306757
Replicate 20.71943878991896
Replicate 32.2051097491262
Condition 2: 8 Hour
Replicate 12.2020783479648
Replicate 22.6748949460543
Replicate 33.0120219441822
Condition 3: 24 Hour
Replicate 11.1872219288366
Replicate 20.61586444500944
Replicate 31.6449159394641


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_117152.p1 GENE.S_Transcript_117152~~S_Transcript_117152.p1 ORF type:5prime_partial len:184 (+),score=21.53,TFIID-31kDa|PF02291.11|2.2e-32,CENP-S|PF15630.2|2.3e-06 S_Transcript_117152:2-553(+)
TCAAAACTCCCCCAGCCCCTGCGAAAGCCTTCAAATTCAATTTCTCTTTCCTTCGCTTATCTCTGTCAGACTATCCTTCACCGGCCATCGAACGGTCGGACGTTCCCCAGTCTCCAGGCCCCGCCCTACTTCCGGTCTCGGCGTCCCACGGTCCGGCTGCTCAGTCTTCACGAATCAGGACCACGACCATCAGGACCTCAGGATAGAAGGGTGATGGCAGAAGGAGAAGAAGACTTGCCCCGGGATGCCAAGATTGTGAAATCATTGTTAAAGTCAATGGGTGTAGAGGAGTATGAACCTCGTGTTGTGCACCAGTTTCTGGAGCTTTGGTATCGATATGTTGTTGATGTATTGACGGATGCACAAGTCTACTCAGAGCATGCTGGCAAAGGCACAATCGATTGTGATGATATTAAGCTTGCAATTCAATCGAAAGTGAATTTCAGCTTCTCACAACCACCTCCTCGTGAGGTGCTTTTAACTTCTCACAACCTGTTCTATAGAAATTTATCTGGTGATGTTAGCGTGAAACTTGGTTCTGCTTGGCAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_117152.p1 GENE.S_Transcript_117152~~S_Transcript_117152.p1 ORF type:5prime_partial len:184 (+),score=21.53,TFIID-31kDa|PF02291.11|2.2e-32,CENP-S|PF15630.2|2.3e-06 S_Transcript_117152:2-553(+)
SKLPQPLRKPSNSISLSFAYLCQTILHRPSNGRTFPSLQAPPYFRSRRPTVRLLSLHESGPRPSGPQDRRVMAEGEEDLPRDAKIVKSLLKSMGVEEYEPRVVHQFLELWYRYVVDVLTDAQVYSEHAGKGTIDCDDIKLAIQSKVNFSFSQPPPREVLLTSHNLFYRNLSGDVSVKLGSAWQ*

Click here to download the sequence:
Link to NCBI Protein BLAST