Transcript Information: S_Transcript_117267.p1


Annotated TAIR IDAT5G10490.1
Annotated Gene NameMSCS-like 2
Annotated Gene Symbol(s)MSL2
Annotation TypeHomolog
Chromosome Positionchr5:3300376-3304005 | Reverse length=673
E-Value7E-148
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 130.604951420457
Replicate 231.18876160176
Replicate 334.370553610346
Condition 2: 8 Hour
Replicate 138.628036551716
Replicate 239.404960672246
Replicate 337.738739282456
Condition 3: 24 Hour
Replicate 136.540532384267
Replicate 235.695503232747
Replicate 333.820468634133


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_117267.p1 GENE.S_Transcript_117267~~S_Transcript_117267.p1 ORF type:5prime_partial len:440 (+),score=81.77,MS_channel|PF00924.14|1.1e-27 S_Transcript_117267:1-1320(+)
TCACGCTTCATTCAACAGACGCAAAAGTTCTTTATGGAATCAAGCGACTCTAGTGACACAAGAAATATGGGTTTTCAATTTGCTGGCAAGGCTATCTATACAGCTGTTTGGGTGGCATCAGTTTCACTGTTCATGGAATTGCTGGGGTTCTCTACCCAAAAATGGCTAACTGCTGGAGGTCTCGGGACAGTATTGCTCACACTTGCTGGTCGTGAGATATTCACGAACTTTCTCTCAAGTGTGATGATTCATGCAACACGGCCATTTGTGCTGAATGAATGGATTCAGACAAAAGTTGAAGGCTACGAAGTGTCCGGTACCATTGAGCATGTCGGTTGGTGGTCACCAACAATAATCAGAGGGGATGACCGTGAAGCGATTTATATTCCAAACCATAAGTTCACAGTTACTGTTGTCAGAAATCTGAGCCAGAAAACTCATTGGCGCTTTAAGACCCATCTTGCCATTAGTCACTTGGATGTCAACAAGATTAATACCATTGTAGCTGACATGCGCAAAATTTTGGCTAAAAGTCCCCTTGTAGAGCAGCAGAGGTTGCATAGGAGAGTTTTCCTGGAGAACATCAACCCGGAGAACCAGGCACTAGTGATTCTGATATCGTGTTTTGTGAAAACCTCTCACTTCGAGGAGTACCTTTGTGTCAAGGAAGCGATACTCTTGGATCTTTTGAAGGTTATCAGCCATCATCGTGCCCGACTGGCCACTCCCATCCGGACTATTCGAAAAGTTTACTCTGAGGCTGATGTTGAGAATGTCCCCTTTTCTGAAACTGCCTTCACTTCCAGGGCAGCCACTAACCATCCTTTCCTGCTGATTGAACCTTTTTACAAGATAAACGGTGACAGTAGAAATAAACCTACAGCCCGTTCAGTAAATGCGAATGAAGAAAAAGACGAGAAGTCTGATATGACTCTGAAATCTGACTTGAAGTTGGATGCCAAAACTGATGATCAGGAGAAGGTAGATGTAAATGGAGTTTTGGAATCAGATCTTAATGAGGTGGGAAGCCCTTCAACAGCTCCAAGACGAGATGATGAAACCCCTACAACCTCACCAACAACTGCAAGGCCAGTCTTAGATGAAAATATTGTTCTCGGTGTTGCTCTAGAGGGCTCTAAGCGAACCCTTCCAATTGAGGAAGAAATGCCAGCATCACCTCCTACTGCAGAAGTAAAGGAACTAGCTGGCTCACGCAATGGAGTTAAATCTCCATCCAGTGCAGATGACAAGAAAGATGATCAGGTATCACCAACTGGTAGTGTAGTCCCAGGCGATAACCGTGAAAAGCAAAGTGGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_117267.p1 GENE.S_Transcript_117267~~S_Transcript_117267.p1 ORF type:5prime_partial len:440 (+),score=81.77,MS_channel|PF00924.14|1.1e-27 S_Transcript_117267:1-1320(+)
SRFIQQTQKFFMESSDSSDTRNMGFQFAGKAIYTAVWVASVSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVLNEWIQTKVEGYEVSGTIEHVGWWSPTIIRGDDREAIYIPNHKFTVTVVRNLSQKTHWRFKTHLAISHLDVNKINTIVADMRKILAKSPLVEQQRLHRRVFLENINPENQALVILISCFVKTSHFEEYLCVKEAILLDLLKVISHHRARLATPIRTIRKVYSEADVENVPFSETAFTSRAATNHPFLLIEPFYKINGDSRNKPTARSVNANEEKDEKSDMTLKSDLKLDAKTDDQEKVDVNGVLESDLNEVGSPSTAPRRDDETPTTSPTTARPVLDENIVLGVALEGSKRTLPIEEEMPASPPTAEVKELAGSRNGVKSPSSADDKKDDQVSPTGSVVPGDNREKQSG*

Click here to download the sequence:
Link to NCBI Protein BLAST