Transcript Information: S_Transcript_117414.p1


Annotated TAIR IDAT3G56370.1
Annotated Gene NameLeucine-rich repeat protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:20899403-20902390 | Reverse length=964
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.9015921193113
Replicate 26.3004048530223
Replicate 35.5708470850464
Condition 2: 8 Hour
Replicate 17.6287736495311
Replicate 28.3952091802685
Replicate 39.0757165575848
Condition 3: 24 Hour
Replicate 14.0536897199041
Replicate 26.5888606850824
Replicate 36.0064868634864


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_117414.p1 GENE.S_Transcript_117414~~S_Transcript_117414.p1 ORF type:complete len:970 (+),score=191.02,LRR_8|PF13855.2|3.8e-06,LRR_8|PF13855.2|3.1e-05,LRR_8|PF13855.2|3.2e-06,LRR_8|PF13855.2|0.00069,LRR_8|PF13855.2|9.1e-06,LRR_8|PF13855.2|0.0013,LRR_8|PF13855.2|3.9e-09,LRR_8|PF13855.2|0.0052,LRR_8|PF13855.2|2.8e-10,LRR_8|PF13855.2|1.6e-09,LRR_8|PF13855.2|1.2e+04,LRR_8|PF13855.2|1.1e+03,Pkinase|PF00069.21|1.2e-43,Pkinase_Tyr|PF07714.13|9.5e-43,LRR_4|PF12799.3|0.49,LRR_4|PF12799.3|0.13,LRR_4|PF12799.3|0.037,LRR_4|PF12799.3|14,LRR_4|PF12799.3|0.056,LRR_4|PF12799.3|0.32,LRR_4|PF12799.3|0.71,LRR_4|PF12799.3|0.00059,LRR_4|PF12799.3|1,LRR_4|PF12799.3|0.0029,LRR_4|PF12799.3|0.011,LRR_1|PF00560.29|1.2,LRR_1|PF00560.29|0.18,LRR_1|PF00560.29|3.4e+02,LRR_1|PF00560.29|2.3e+03,LRR_1|PF00560.29|2.6,LRR_1|PF00560.29|5e+02,LRR_1|PF00560.29|38,LRR_1|PF00560.29|2.2e+02,LRR_1|PF00560.29|2.6,LRR_1|PF00560.29|0.45,LRR_1|PF00560.29|1.6e+03,LRR_1|PF00560.29|1e+04,LRR_1|PF00560.29|4.7,LRR_1|PF00560.29|1.5,LRR_1|PF00560.29|1.9e+02,LRR_1|PF00560.29|3.1,LRR_1|PF00560.29|2e+02,LRR_1|PF00560.29|6,LRR_1|PF00560.29|1.8e+02,LRRNT_2|PF08263.8|2.5e-12,LRRNT_2|PF08263.8|2.5e+03 S_Transcript_117414:238-3147(+)
ATGCTACTGAAATCTCTGTTTTTTTGGGTGTGTTTTGTATTGTTACCTTGCATTGTTGTGGGTTCAGATTCATTGAATGATGATGTTCTTGGGTTAATAGTATTTAAGGCAGGTCTTGATGACCCTGAATCCAAGTTAGTATCTTGGAATGATAGTGATGATAATCCTTGCAAATGGAAAGGTATAAGATGTGATGAAAACTCAAACAGAGTAACTGAAATTACTCTTGATGGTTTCTCACTTTCTGGCCAGATTAGTAGAAGTCTTTTGAGGTTACAATCACTCCAAAAACTGAGTCTTTCAAACAACAATCTTTCTGGGTCTATAAACCCTGAATTTGCCCACCTTTGGAGCTTACAATCCCTTGATTTGAGTGGCAACAATCTCTCAGGTTCAATCCCTTCTGAGCTTTTTCAACAATGTGGGTCTTTAAAGTTTGTTTCTTTTGCCAACAATAGGTTGCTTGGTGTGATACCTGAGTCTTTAGGCTCTTGTATGACCTTACAAGCTGTCAACTTTTCATCCAATCATATCTCAGGGAAGTTGCCTTCCAAAATCTGGTCTTTGAATGGGTTACAATCACTTGATTTGTCTAATAATCTATTAGAAGGTCAACTTCCTGGTGGGTTTGGGAGTATGTATAGTTTGAAGGTTTTGAGTTTAGGTAAAAATGCATTTACTGGGCAGTTACCTGATGATATTGGAAGTTGTGGTCAGTTACAAAAGATTGATTTTAGTGAGAATTCATTCTCTGGGGTTGTTCCTGAATCACTACAAAAGCTTAATATGTGTACTTCTGTGAGTTTGAATGGTAATTTACTCACTAGGGAAGTTCCTAATTGGATTGGTCATATGCAAAGCCTTGAAACTTTGGATCTTTCTTCAAACAGATTCTTTGGAAGGATTCCATTTGAGATAGGAAATGTCAAGTCATTGAAAGTATTGAATTTATCCTCCAATGGGTTGATAGGCAATCTGCCTGAATCTCTGATGAACTGTGTGAATCTTCTGACAGTTGATTTTAGTCACAATATGTTTAAAGGGAAATTACCCAATTGGATTTTTGAATTGGGTTTACAAGTAGTTTCACTTTCTGGGAATAAGTTTAAGGGAAATGTTGAGTACCCTTCTGTTAGATCAACTTCACCTTCTTATAATAGTCTTCAGGTTCTGGATTTGTCCTGTAATGAATTGTCTGGTGTTATTCCTTCAGAAATTGGTGCTTTTAGAAGTTTACAATACTTGAATATGTCACAGAACTCATTAATGGGTGATATTCCAAGAAGTTTGGGTGATTTGAATATGATTCAAGTCATTGATTTGAGTCATAATATGCTGAATGGGAGTATACCTCCTGAAATAGGAGGTGATGTTGCACTTAGAGAGCTAAGGCTTGAAGGGAACAGATTAACTGGGAGTATTCCTTCTCAGATTGAGAAATGCTCATCTTTGACTACACTAATGTTGTCAGAGAACAATCTCACAGGTTCGATACCTCATGCAGTTGCAAACCTAACCAACCTTGAAGTTGTTGATTTGTCTCATAATAATCTCTCTGGCAACCTTCCGAAAGAGCTAACGGATCTCCCACACCTAACCGCCTTTAACATCTCAAGCAACAACCTAGAAGGAGAACTTCCTGCTGGTGGCTTCTTCGACAATATCCCTCTCTCGTCTGTCAATGGAAACCCGTCATTATGTGGATCGGTGGTTAACCAATCTTGTCCTTCTAACCACCCTAAGCCTATTGTTCTCAACCCTAATTCTTCCTCGGATAATGGGGATGGCTCTTTCCCAAGTACCCGTCACAAGAAGCTTGTGCTTAGCATCTCTGCCCTTATCGCCATCAGTGCTGCTGCATTCATCTTCCTTGGTGTCGTGATAATCACTATACTCAACTTCCGTGTCCGTAATTCTGCTGCTCGCTCGGCTGCACCCTTAGCATTCTCGGCCAGGGATGAGTTCAGCCACTCTCCGATGAGTGATTCACAGTATGGAAAGCTTGTCATGTTCTCTGGTGAAGCTGATTTTGGAGCTGGGGCCCATGCTCTACTCAATAAAGACTCTGAGCTTGGTCGTGGGGGTTTTGGAGTCGTTTATCATACAGTTCTTGCAGATGGTCGCTCTGTTGCAATTAAGAAGCTCAGCATCTCGAGTTTGATAAAGTCTCAAGAGGAGTTCGAGAGGGAGGTTAGGAAGCTCGGAAAAGTGAGGCACCATAATCTCGTGGCATTAGAAGGATACTATTGGACCCCGTCCTTGCAGCTCCTAATCAATGAATATGTTCCTGGTGGGAGTTTGTTCAAGCATCTTCATGACGATCCTAACAGAACTTCTCTTTCATGGCACCAACGGTTCAACATCATTGTTGGCATGGCAAAGGGTTTGGCTCATTTGCATCAGATGAACATAACTCACTACAACCTCAAATCGTCAAACATTCTGCTTGACAGCAATGGTGAGCCCAAGGTTGGAGACTTTGGCCTGGCCAGGTTGTTGCCTATGCTAGACCGATACATTTTGAGCAGCAAGATTCAGAGTGCACTCGGGTACATGGCACCTGAATTTGCATGTCGAACTGTCAAGATAACCGAGAAATGTGATGTCTATGGTTTTGGAATCTTGGTACTTGAAGTTGTAACCGGGAAGAAGCCAGTAGAATACATGGAGGATGATGTTGTCGTGCTTTATGATATGATTAGAGGTGCTTTGGAGGAAGGCAAGGCAGAGGATTGTATCGATCAGAGACTTCTTGGGAACTTTGTGGCCGAGGAGGTTATTCCAGTGATAAAACTCGGTTTGATTTGTGCATCTCAGGTTCCATCGAATCGACCAGATATGGCAGAGGTGGTTAACATATTGGAGCTCATCCAATGCCCTTCTGAAGGACGAGAAGAGGAGATCGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_117414.p1 GENE.S_Transcript_117414~~S_Transcript_117414.p1 ORF type:complete len:970 (+),score=191.02,LRR_8|PF13855.2|3.8e-06,LRR_8|PF13855.2|3.1e-05,LRR_8|PF13855.2|3.2e-06,LRR_8|PF13855.2|0.00069,LRR_8|PF13855.2|9.1e-06,LRR_8|PF13855.2|0.0013,LRR_8|PF13855.2|3.9e-09,LRR_8|PF13855.2|0.0052,LRR_8|PF13855.2|2.8e-10,LRR_8|PF13855.2|1.6e-09,LRR_8|PF13855.2|1.2e+04,LRR_8|PF13855.2|1.1e+03,Pkinase|PF00069.21|1.2e-43,Pkinase_Tyr|PF07714.13|9.5e-43,LRR_4|PF12799.3|0.49,LRR_4|PF12799.3|0.13,LRR_4|PF12799.3|0.037,LRR_4|PF12799.3|14,LRR_4|PF12799.3|0.056,LRR_4|PF12799.3|0.32,LRR_4|PF12799.3|0.71,LRR_4|PF12799.3|0.00059,LRR_4|PF12799.3|1,LRR_4|PF12799.3|0.0029,LRR_4|PF12799.3|0.011,LRR_1|PF00560.29|1.2,LRR_1|PF00560.29|0.18,LRR_1|PF00560.29|3.4e+02,LRR_1|PF00560.29|2.3e+03,LRR_1|PF00560.29|2.6,LRR_1|PF00560.29|5e+02,LRR_1|PF00560.29|38,LRR_1|PF00560.29|2.2e+02,LRR_1|PF00560.29|2.6,LRR_1|PF00560.29|0.45,LRR_1|PF00560.29|1.6e+03,LRR_1|PF00560.29|1e+04,LRR_1|PF00560.29|4.7,LRR_1|PF00560.29|1.5,LRR_1|PF00560.29|1.9e+02,LRR_1|PF00560.29|3.1,LRR_1|PF00560.29|2e+02,LRR_1|PF00560.29|6,LRR_1|PF00560.29|1.8e+02,LRRNT_2|PF08263.8|2.5e-12,LRRNT_2|PF08263.8|2.5e+03 S_Transcript_117414:238-3147(+)
MLLKSLFFWVCFVLLPCIVVGSDSLNDDVLGLIVFKAGLDDPESKLVSWNDSDDNPCKWKGIRCDENSNRVTEITLDGFSLSGQISRSLLRLQSLQKLSLSNNNLSGSINPEFAHLWSLQSLDLSGNNLSGSIPSELFQQCGSLKFVSFANNRLLGVIPESLGSCMTLQAVNFSSNHISGKLPSKIWSLNGLQSLDLSNNLLEGQLPGGFGSMYSLKVLSLGKNAFTGQLPDDIGSCGQLQKIDFSENSFSGVVPESLQKLNMCTSVSLNGNLLTREVPNWIGHMQSLETLDLSSNRFFGRIPFEIGNVKSLKVLNLSSNGLIGNLPESLMNCVNLLTVDFSHNMFKGKLPNWIFELGLQVVSLSGNKFKGNVEYPSVRSTSPSYNSLQVLDLSCNELSGVIPSEIGAFRSLQYLNMSQNSLMGDIPRSLGDLNMIQVIDLSHNMLNGSIPPEIGGDVALRELRLEGNRLTGSIPSQIEKCSSLTTLMLSENNLTGSIPHAVANLTNLEVVDLSHNNLSGNLPKELTDLPHLTAFNISSNNLEGELPAGGFFDNIPLSSVNGNPSLCGSVVNQSCPSNHPKPIVLNPNSSSDNGDGSFPSTRHKKLVLSISALIAISAAAFIFLGVVIITILNFRVRNSAARSAAPLAFSARDEFSHSPMSDSQYGKLVMFSGEADFGAGAHALLNKDSELGRGGFGVVYHTVLADGRSVAIKKLSISSLIKSQEEFEREVRKLGKVRHHNLVALEGYYWTPSLQLLINEYVPGGSLFKHLHDDPNRTSLSWHQRFNIIVGMAKGLAHLHQMNITHYNLKSSNILLDSNGEPKVGDFGLARLLPMLDRYILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGILVLEVVTGKKPVEYMEDDVVVLYDMIRGALEEGKAEDCIDQRLLGNFVAEEVIPVIKLGLICASQVPSNRPDMAEVVNILELIQCPSEGREEEIE*

Click here to download the sequence:
Link to NCBI Protein BLAST