Transcript Information: S_Transcript_117479.p5


Annotated TAIR IDAT2G02650.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:735411-736546 | Forward length=365
E-Value3E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.71444298617934
Replicate 20.8884344788261
Replicate 31.3615442746282
Condition 2: 8 Hour
Replicate 12.0037279492608
Replicate 20.75073317582975
Replicate 30.85835627939522
Condition 3: 24 Hour
Replicate 10.58643982525085
Replicate 20.30421223592413
Replicate 32.5391319870922


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_117479.p5 GENE.S_Transcript_117479~~S_Transcript_117479.p5 ORF type:complete len:149 (+),score=20.99,zf-RVT|PF13966.2|8.1e-18,zf-RVT|PF13966.2|4e+03 S_Transcript_117479:4135-4581(+)
ATGCTTGGTAGAGCTCAGCTGCAGGCATATGAATTGGGGGAGGAAGCAACTAGTGTTTGGCAATCTATATGGAGCCTAAGGGTGCATCCCAAATTGAAGCACTTTATTTGGAGAGTTTGTAGAGGTGTGTTAGCTGTCAAGGAAAGACTAGTGGCTAGACACATATGTAACTCAACACAATGTGAAGTCTGCGGAGCAGAGGAGGAAACTGTTATGCATGCACTCTTCGATTGTCGTTTTGCAACCAATATCTGGGGATCGAGCAATTTTGTGGGAACACTATGTGCAGCTCCCTCAAGCTCACTGTTCGAAAGGGTAGGTTGGATTTTGAAGAATGTTGAGGGCAAAGAAGCAAGACTTTTTCTCACCTTAATGTGGGTTGCATGGACAGCCAGAAATGAATTTATTTTGCAATTGCTGTCAAATAATCGAGAGCCCAATACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_117479.p5 GENE.S_Transcript_117479~~S_Transcript_117479.p5 ORF type:complete len:149 (+),score=20.99,zf-RVT|PF13966.2|8.1e-18,zf-RVT|PF13966.2|4e+03 S_Transcript_117479:4135-4581(+)
MLGRAQLQAYELGEEATSVWQSIWSLRVHPKLKHFIWRVCRGVLAVKERLVARHICNSTQCEVCGAEEETVMHALFDCRFATNIWGSSNFVGTLCAAPSSSLFERVGWILKNVEGKEARLFLTLMWVAWTARNEFILQLLSNNREPNT*

Click here to download the sequence:
Link to NCBI Protein BLAST