Transcript Information: S_Transcript_117598.p2


Annotated TAIR IDAT4G20520.1
Annotated Gene NameRNA binding;RNA-directed DNA polymerases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11045912-11047716 | Forward length=376
E-Value5E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2184265625745
Replicate 20.85061357330178
Replicate 30.79992590242123
Condition 2: 8 Hour
Replicate 10.61663779230264
Replicate 20.97034524220501
Replicate 31.2327237169146
Condition 3: 24 Hour
Replicate 11.1054037428975
Replicate 20.76456231823822
Replicate 30.4862080849179


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_117598.p2 GENE.S_Transcript_117598~~S_Transcript_117598.p2 ORF type:complete len:415 (+),score=54.24,RVT_1|PF00078.23|2.9e-47 S_Transcript_117598:3490-4734(+)
ATGGTGCAGGCTTTCTTCCATTCAGGGTTTCTCTTGAGGGAATTAAATCATACCTTCATAACTTTGATCCCTAAATCCGGTAAAGCAATGAAGGTAACTGATTTCAGACCCATCTCCTTATGCAATGTAGCTTATAAAATAATCTCCAAGATTATAGCCAATAGACTAAAATCCTTCTTAAATGAGATTATTAGCCCTTTTCAATCTGCTTTCATACCTGGCAGATATATCACTGATAACACGATTATGATTAATGAGGTAATTCATTGTATGTCAAAAAACAACTCCAAGAAGGGTCTTATGGCTGTGAAAGTTGATATGGCAAAAGCTTACGACAAAGTAGAATGGGTGTTTATTACTAATGTACTTAAGGTTTTGGGATGTTCTGATAAGTTTGTGCAACTTGTTAGCCAGTGCATTTCCACAACCTCATATTTTATCTTGGTGAATGGTAGGCCCCAAGGGTTATATAGACCTGGCAGAGGGCTTAGACAGGGAGACTCTCTGTCCCCTTTCCTTTTTGTCATCACTATGGATGCTCTGTCCACACTGATACAGAGAAAACAACAACAAGGGAAGATAAAAGGGATCAACATTGCTAGAGATTGTCCACCTATCTCGCATTTGATGTATGCAGATGATCTAGTGTTGTTCAGTAGGACTGATGCTCAAAATGCTAGGCAACTTTTGGAGGTGATGGAGACTATTGAGGAATGGAGTGGTCTCAGTGCAAATAAAATGAAGTCAAGCATTTTCTTTAGTAAAAAAACAAAAAGAGAAAATATGGTGGAAGTCAAGAGACTCCTACAGTTTAGAGAGATGGATAAGGATGCTATTTACCTGGGTTTGCCTTTTTTCAGGAAAGAGAGCAGAACCAAGAGATTCAAATTTATCAAGGATAGGATGCAATCCAAATTACAGGGGTGGAAGGCTAGAAACATGTCATATGTAGCTAGAGCTACCCTTATCAAATCAGTAGCTTCAGCTATCCCGGTATACTCCATGTCCAGCAACCTGATGACAAAAAAAATGTGTAGTGAATTGGATGCCATGATGAGAGACTTCTGGTGGGATTTCAATGAAGATATGAGGGAAATTTATTTCAAATCTTGGGAGCATATTTGCAGACCTATGGAAGAGGGTGGTTTGAATTTGAGAAGAATGAAAGATTATAATAAAGCCCTCCAAGGCAAGCTTATCTGGCAACTTGTAAGTGATGACAACAAACTATGGGTTTCCCAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_117598.p2 GENE.S_Transcript_117598~~S_Transcript_117598.p2 ORF type:complete len:415 (+),score=54.24,RVT_1|PF00078.23|2.9e-47 S_Transcript_117598:3490-4734(+)
MVQAFFHSGFLLRELNHTFITLIPKSGKAMKVTDFRPISLCNVAYKIISKIIANRLKSFLNEIISPFQSAFIPGRYITDNTIMINEVIHCMSKNNSKKGLMAVKVDMAKAYDKVEWVFITNVLKVLGCSDKFVQLVSQCISTTSYFILVNGRPQGLYRPGRGLRQGDSLSPFLFVITMDALSTLIQRKQQQGKIKGINIARDCPPISHLMYADDLVLFSRTDAQNARQLLEVMETIEEWSGLSANKMKSSIFFSKKTKRENMVEVKRLLQFREMDKDAIYLGLPFFRKESRTKRFKFIKDRMQSKLQGWKARNMSYVARATLIKSVASAIPVYSMSSNLMTKKMCSELDAMMRDFWWDFNEDMREIYFKSWEHICRPMEEGGLNLRRMKDYNKALQGKLIWQLVSDDNKLWVSQ*

Click here to download the sequence:
Link to NCBI Protein BLAST