Transcript Information: S_Transcript_117598.p3


Annotated TAIR IDAT3G31430.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18636.1); Has 295 Blast hits to 291 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 295; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:12795861-12796871 | Reverse length=336
E-Value2E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.98566671241409
Replicate 21.5525666725659
Replicate 31.0245964490889
Condition 2: 8 Hour
Replicate 11.3427097607084
Replicate 21.2428804799848
Replicate 31.7368468418874
Condition 3: 24 Hour
Replicate 11.9417674213861
Replicate 22.1824411147594
Replicate 31.4946396684513


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_117598.p3 GENE.S_Transcript_117598~~S_Transcript_117598.p3 ORF type:complete len:270 (+),score=38.92,DUF4283|PF14111.2|8.7e-26,zf-CCHC_4|PF14392.2|9.8e+02,zf-CCHC_4|PF14392.2|1e-12 S_Transcript_117598:370-1179(+)
ATGGCAGGTTTACAACTTTGTAATTCTCTGGGGGATACTGAATCCTTGGTGGGGGACATCAAAAAACTTTATATTGCCCCCAAAGAAGATAATGAACTCCCTTCAAACATAAATATCACTGACAAGATTGGTCTGTGCTTAGTTGGGAAAGTTATTTCCAAGAAACCCATTCGCAAGAAGGTGGCTATGACGGTTATTGAAAAGAGCTGGAATCTTGAAGGTGCTTTGGAAATCTCCTTTCTGGGGGAACACGAGCTATTGTTTATCTTTAAAAAAGCGGAGGACAGACAGAAGTTTCTGAATAGGGGTTTTTGGAATGTTATGGGGAAGATGATGATTCTGAAGGAGTGGGAAATGGAGGATAATCTGGAGGAAGTGGATTTTACTAAGGCCACCATTTGGCTTCAAATCCATGGACTTCATTGGTCCAAGTTATCGGCGACGAATGCGGTTCAGATTGGAAAATATTTTGGTCAAGTTCTAGGGGTTGATGTAGTTTCTGAACAGCGTCTCCTCGTAAGGAAGTATCTTAGGGTGAAGGTAAGTCTGGACATATCCAAACCGTTACCTAGAGGTATGTTTATGAAATCTGCTGGTTCTTGGAAATGGATTTCTGTTAAGTTTGAACGTTTAGCCGACTATTGCTATAAATGTGGCGTATTGGGGCATGAATGTGAGGATTGTACACTAGGGTTTAAACCGGTTTTTAACCCTCCTGAAATTGGTTTCGGCCTTGAACTGAGGGCAACTGATTTCTTAGATGTTAATGCCCCTTTAAAACATTTCAAGATATTTTGTCTGAAGAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_117598.p3 GENE.S_Transcript_117598~~S_Transcript_117598.p3 ORF type:complete len:270 (+),score=38.92,DUF4283|PF14111.2|8.7e-26,zf-CCHC_4|PF14392.2|9.8e+02,zf-CCHC_4|PF14392.2|1e-12 S_Transcript_117598:370-1179(+)
MAGLQLCNSLGDTESLVGDIKKLYIAPKEDNELPSNINITDKIGLCLVGKVISKKPIRKKVAMTVIEKSWNLEGALEISFLGEHELLFIFKKAEDRQKFLNRGFWNVMGKMMILKEWEMEDNLEEVDFTKATIWLQIHGLHWSKLSATNAVQIGKYFGQVLGVDVVSEQRLLVRKYLRVKVSLDISKPLPRGMFMKSAGSWKWISVKFERLADYCYKCGVLGHECEDCTLGFKPVFNPPEIGFGLELRATDFLDVNAPLKHFKIFCLKK*

Click here to download the sequence:
Link to NCBI Protein BLAST