Transcript Information: S_Transcript_117617.p1


Annotated TAIR IDAT3G22470.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7966066-7967925 | Reverse length=619
E-Value2E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.16031928454928
Replicate 20.39872511248521
Replicate 30
Condition 2: 8 Hour
Replicate 10.7707972403783
Replicate 20.40431051758542
Replicate 30.12840872051194
Condition 3: 24 Hour
Replicate 10.78957410206967
Replicate 20.68264492699841
Replicate 30.91164015922106


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_117617.p1 GENE.S_Transcript_117617~~S_Transcript_117617.p1 ORF type:5prime_partial len:166 (+),score=24.25,PPR_2|PF13041.2|3.7e-17,PPR_2|PF13041.2|1.9e-15,PPR_2|PF13041.2|5.8e-20,PPR_2|PF13041.2|3.3e-20,PPR_1|PF12854.3|5.8e-07,PPR_1|PF12854.3|8.6e-11,PPR_1|PF12854.3|1.5e-16,PPR_1|PF12854.3|8.3e-12,PPR_1|PF12854.3|7.9e-12,PPR|PF01535.16|9.5e-07,PPR|PF01535.16|2.6e-08,PPR|PF01535.16|9.1e-10,PPR|PF01535.16|6.3e-07,PPR|PF01535.16|0.00044,PPR_3|PF13812.2|0.012,PPR_3|PF13812.2|9.4e-05,PPR_3|PF13812.2|1.9e-06,PPR_3|PF13812.2|0.0042,PPR_3|PF13812.2|0.27,MRP-S27|PF10037.5|19,MRP-S27|PF10037.5|4.2,MRP-S27|PF10037.5|1,MRP-S27|PF10037.5|0.068 S_Transcript_117617:2-499(+)
GACCTACACACATACAACACCCCCATTGATATGTACTGTAAAGAGGGGGAGGTTGAGGAAGCAAAATCCATACTTGACTTTATGGTTAAGAGGGGTGAGAGGCCAAACATTGTTACCTACAGTTCTCTTTTGGATGGATACTGTTTGACAGGCCAAATGGATAAAGCCTCAGAGTTGATGGATCTGATGGCAAAACACGGGTGCCAACCTGATGTTGTCAGCTTCAACACCGTCATCAATGGGTATTGCAAGAGTAAGAACCTCGACGATGCTTTCAGGCTTTTCAAAGAAATGCATATCAAACGATTGAACCCTAATGTAATTAAATATAATACTCTGATACACGGCTTGTGCAAGGGTACTAGGCTCCAACATGCAGTTCGACTCTTCAAAGAGATGCAAGCTCAGGGGATAACTCCAGATGTTGTCACCTTTAATACTTTGTTGGATGGCTTATGTAAGGATGGACAACTTGATGTGGCTGTAACAATGTCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_117617.p1 GENE.S_Transcript_117617~~S_Transcript_117617.p1 ORF type:5prime_partial len:166 (+),score=24.25,PPR_2|PF13041.2|3.7e-17,PPR_2|PF13041.2|1.9e-15,PPR_2|PF13041.2|5.8e-20,PPR_2|PF13041.2|3.3e-20,PPR_1|PF12854.3|5.8e-07,PPR_1|PF12854.3|8.6e-11,PPR_1|PF12854.3|1.5e-16,PPR_1|PF12854.3|8.3e-12,PPR_1|PF12854.3|7.9e-12,PPR|PF01535.16|9.5e-07,PPR|PF01535.16|2.6e-08,PPR|PF01535.16|9.1e-10,PPR|PF01535.16|6.3e-07,PPR|PF01535.16|0.00044,PPR_3|PF13812.2|0.012,PPR_3|PF13812.2|9.4e-05,PPR_3|PF13812.2|1.9e-06,PPR_3|PF13812.2|0.0042,PPR_3|PF13812.2|0.27,MRP-S27|PF10037.5|19,MRP-S27|PF10037.5|4.2,MRP-S27|PF10037.5|1,MRP-S27|PF10037.5|0.068 S_Transcript_117617:2-499(+)
DLHTYNTPIDMYCKEGEVEEAKSILDFMVKRGERPNIVTYSSLLDGYCLTGQMDKASELMDLMAKHGCQPDVVSFNTVINGYCKSKNLDDAFRLFKEMHIKRLNPNVIKYNTLIHGLCKGTRLQHAVRLFKEMQAQGITPDVVTFNTLLDGLCKDGQLDVAVTMS*

Click here to download the sequence:
Link to NCBI Protein BLAST