Transcript Information: S_Transcript_117621.p1


Annotated TAIR IDAT3G22470.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7966066-7967925 | Reverse length=619
E-Value3E-31
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.18481250857764
Replicate 20.15321381637163
Replicate 30.64037278068058
Condition 2: 8 Hour
Replicate 10.44427896494027
Replicate 21.0875204199867
Replicate 30.59210687791615
Condition 3: 24 Hour
Replicate 10.45510173938738
Replicate 20.3147751607826
Replicate 30.17515308614664


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_117621.p1 GENE.S_Transcript_117621~~S_Transcript_117621.p1 ORF type:internal len:144 (+),score=12.83,PPR_2|PF13041.2|2.2e-10,PPR_2|PF13041.2|5.6e-19,PPR_2|PF13041.2|4.5e-15,PPR_2|PF13041.2|3e-12,PPR_1|PF12854.3|0.24,PPR_1|PF12854.3|1.9e-11,PPR_1|PF12854.3|3.9e-13,PPR_1|PF12854.3|7.1e-09,PPR_1|PF12854.3|0.004,PPR|PF01535.16|0.0015,PPR|PF01535.16|3.2e-09,PPR|PF01535.16|1.3e-07,PPR|PF01535.16|0.00033,PPR|PF01535.16|72,PPR_3|PF13812.2|2.2,PPR_3|PF13812.2|1.1e-05,PPR_3|PF13812.2|0.0016,PPR_3|PF13812.2|0.0034,PPR_3|PF13812.2|4.1e+03 S_Transcript_117621:2-430(+)
TATTGCAAAGGCGGGAAGGTTGAGCAAGCAAAGTCCATACTCGACTTGATGATTGAGAGAGGTATGTGGCCTAACATTGTTACCTACAATTCCCTTTTGGATGGATACTGTTTGACAGGCCAAATGGATAAAGCCTCAGAGTTGATGGACCTGATGGCAAAGCATGGGTGCCAGCCTGATCTTGTCAGCTTCAACACCGTTATCAATGGGTATTGCAAGAGTAATAACCTCGTCGAAGCTTTCAGGCTGCTCAATGAAACGCCTTCTAAAGGATTGAGCCCCGATATATTTACGTATAACACTTTTATAGCTGGCTCGTTCAAGGGTAATAGACTACCATGTGCACTTCAGCTTTTCAAACAGATGCGAGCTCAGGGGATAATTCCAAATGTTGTCACCTGTACTTCATTGGTAGATGGCCTTTCTAAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_117621.p1 GENE.S_Transcript_117621~~S_Transcript_117621.p1 ORF type:internal len:144 (+),score=12.83,PPR_2|PF13041.2|2.2e-10,PPR_2|PF13041.2|5.6e-19,PPR_2|PF13041.2|4.5e-15,PPR_2|PF13041.2|3e-12,PPR_1|PF12854.3|0.24,PPR_1|PF12854.3|1.9e-11,PPR_1|PF12854.3|3.9e-13,PPR_1|PF12854.3|7.1e-09,PPR_1|PF12854.3|0.004,PPR|PF01535.16|0.0015,PPR|PF01535.16|3.2e-09,PPR|PF01535.16|1.3e-07,PPR|PF01535.16|0.00033,PPR|PF01535.16|72,PPR_3|PF13812.2|2.2,PPR_3|PF13812.2|1.1e-05,PPR_3|PF13812.2|0.0016,PPR_3|PF13812.2|0.0034,PPR_3|PF13812.2|4.1e+03 S_Transcript_117621:2-430(+)
YCKGGKVEQAKSILDLMIERGMWPNIVTYNSLLDGYCLTGQMDKASELMDLMAKHGCQPDLVSFNTVINGYCKSNNLVEAFRLLNETPSKGLSPDIFTYNTFIAGSFKGNRLPCALQLFKQMRAQGIIPNVVTCTSLVDGLSK

Click here to download the sequence:
Link to NCBI Protein BLAST