Transcript Information: S_Transcript_117622.p1


Annotated TAIR IDAT3G22470.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7966066-7967925 | Reverse length=619
E-Value2E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.28311703441681
Replicate 20.15647368480507
Replicate 30.26159909338441
Condition 2: 8 Hour
Replicate 10.30248780591678
Replicate 20.3173311863791
Replicate 30.1511762241488
Condition 3: 24 Hour
Replicate 10.15492825170634
Replicate 20.32147250462904
Replicate 30.35775949510803


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_117622.p1 GENE.S_Transcript_117622~~S_Transcript_117622.p1 ORF type:3prime_partial len:282 (+),score=35.29,PPR_2|PF13041.2|2e-17,PPR_2|PF13041.2|1.5e-10,PPR_2|PF13041.2|1.5e-13,PPR_2|PF13041.2|1e-11,PPR_2|PF13041.2|5.2e-07,PPR_2|PF13041.2|2.5e-17,PPR_2|PF13041.2|1.3e-15,PPR_1|PF12854.3|3.6e-09,PPR_1|PF12854.3|3.9e-09,PPR_1|PF12854.3|8.4e-11,PPR_1|PF12854.3|2e-08,PPR_1|PF12854.3|1.5e-08,PPR_1|PF12854.3|2.8e-08,PPR_1|PF12854.3|1.5e-11,PPR_1|PF12854.3|0.00081,PPR|PF01535.16|5.6e-08,PPR|PF01535.16|3.7e-07,PPR|PF01535.16|3e-06,PPR|PF01535.16|0.00094,PPR|PF01535.16|2.2e-05,PPR|PF01535.16|1.5e-06,PPR|PF01535.16|3.7e-10,PPR|PF01535.16|2.8,PPR_3|PF13812.2|0.00014,PPR_3|PF13812.2|0.01,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|0.0099,PPR_3|PF13812.2|2.3,PPR_3|PF13812.2|6.8e-05,PPR_3|PF13812.2|1.8e-05,PPR_3|PF13812.2|7e+02,ECSIT|PF06239.7|75,ECSIT|PF06239.7|2.2,ECSIT|PF06239.7|1.3,ECSIT|PF06239.7|18,MRP-S27|PF10037.5|11,MRP-S27|PF10037.5|1.2e+02,MRP-S27|PF10037.5|71,MRP-S27|PF10037.5|0.067,MRP-S27|PF10037.5|22 S_Transcript_117622:508-1350(+)
ATGAGGCTAAGGCTACATTTGCTGATAATGTTGGAGAGCAATGTAGCACCAAATGTCCAAACTTATAGCATGCTGATTGACATGTATTGCAAAGGCGGCAAGGTCGAGCAAGCAAAGTCCTTACTTCACTTGATGATTGAGAGGGGTGTGTGGCCTAACATTGTTACCTACAATTCTCTTTTGGATGGATATTGTTCGGGATATCAAATGGATGAAGCATCAGAGTTAATAGATTTGATGGAAAATATTGGATGCCAACCTGATCTTGTCAGCGTCAATACCGTGATCAATGGGTATTGCAAGAGTAATAACCTCGTCGAAGCTTTCAGGCTGCTCAATGAAACGCCTTCTAAAGGATTGAGCCCCGATATATTTACGTATAACACTTTTATAGCTGGCTCGTTCAAGGGTAATAGACTACCATGTGCACTTCAGCTTTTCAAACAGATGCGAGCTCAGGGGATAATTCCAAATGTTGTCACCTGTACTTCATTGGTAGATGGCCTTTCTAAAAAGGGCCAACTTGATGAGGCAGTAGCAATGTCTAAAAAGATGGAGAGTAATGGAGTGGTAAAGAATCTTGTGACCTATAATGTGTTGATTGATGCCATGTGTGAAAAAGGGAACTGGAAAGAGGCAGCTCATGTCTTTTCCAAGCTCATAACCAAGGGACTGCAACCAGATCATATCACTTATAATGTAATGATAAAAGGACTTTCTAAGAAGGGGCTGTTAGATCAGGCTCATGAATTATTCAAGAAGATGGAGGAGCATGGCTGTTTTCCGGATCGTTGTTCCTACAATACACTCATTAGGGGTTTCCTTTGCAACAACCAAATCTCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_117622.p1 GENE.S_Transcript_117622~~S_Transcript_117622.p1 ORF type:3prime_partial len:282 (+),score=35.29,PPR_2|PF13041.2|2e-17,PPR_2|PF13041.2|1.5e-10,PPR_2|PF13041.2|1.5e-13,PPR_2|PF13041.2|1e-11,PPR_2|PF13041.2|5.2e-07,PPR_2|PF13041.2|2.5e-17,PPR_2|PF13041.2|1.3e-15,PPR_1|PF12854.3|3.6e-09,PPR_1|PF12854.3|3.9e-09,PPR_1|PF12854.3|8.4e-11,PPR_1|PF12854.3|2e-08,PPR_1|PF12854.3|1.5e-08,PPR_1|PF12854.3|2.8e-08,PPR_1|PF12854.3|1.5e-11,PPR_1|PF12854.3|0.00081,PPR|PF01535.16|5.6e-08,PPR|PF01535.16|3.7e-07,PPR|PF01535.16|3e-06,PPR|PF01535.16|0.00094,PPR|PF01535.16|2.2e-05,PPR|PF01535.16|1.5e-06,PPR|PF01535.16|3.7e-10,PPR|PF01535.16|2.8,PPR_3|PF13812.2|0.00014,PPR_3|PF13812.2|0.01,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|0.0099,PPR_3|PF13812.2|2.3,PPR_3|PF13812.2|6.8e-05,PPR_3|PF13812.2|1.8e-05,PPR_3|PF13812.2|7e+02,ECSIT|PF06239.7|75,ECSIT|PF06239.7|2.2,ECSIT|PF06239.7|1.3,ECSIT|PF06239.7|18,MRP-S27|PF10037.5|11,MRP-S27|PF10037.5|1.2e+02,MRP-S27|PF10037.5|71,MRP-S27|PF10037.5|0.067,MRP-S27|PF10037.5|22 S_Transcript_117622:508-1350(+)
MRLRLHLLIMLESNVAPNVQTYSMLIDMYCKGGKVEQAKSLLHLMIERGVWPNIVTYNSLLDGYCSGYQMDEASELIDLMENIGCQPDLVSVNTVINGYCKSNNLVEAFRLLNETPSKGLSPDIFTYNTFIAGSFKGNRLPCALQLFKQMRAQGIIPNVVTCTSLVDGLSKKGQLDEAVAMSKKMESNGVVKNLVTYNVLIDAMCEKGNWKEAAHVFSKLITKGLQPDHITYNVMIKGLSKKGLLDQAHELFKKMEEHGCFPDRCSYNTLIRGFLCNNQIS

Click here to download the sequence:
Link to NCBI Protein BLAST