Transcript Information: S_Transcript_117624.p1


Annotated TAIR IDAT1G62914.1
Annotated Gene Namepentatricopeptide (PPR) repeat-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:23301576-23303162 | Forward length=528
E-Value8E-68
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.4171316808022
Replicate 20.069162349710078
Replicate 30.40469953788465
Condition 2: 8 Hour
Replicate 11.0696120535239
Replicate 20.070131186958391
Replicate 30.33410419443544
Condition 3: 24 Hour
Replicate 10.54783406872963
Replicate 20.4262785876429
Replicate 30.15813193984399


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_117624.p1 GENE.S_Transcript_117624~~S_Transcript_117624.p1 ORF type:5prime_partial len:319 (+),score=51.64,PPR_2|PF13041.2|0.013,PPR_2|PF13041.2|7.7e-06,PPR_2|PF13041.2|2.9e-09,PPR_2|PF13041.2|2.4e-17,PPR_2|PF13041.2|1.1e-15,PPR_2|PF13041.2|2.1e-15,PPR_2|PF13041.2|2.5e-16,PPR_2|PF13041.2|3.2e-18,PPR_1|PF12854.3|9.7e-08,PPR_1|PF12854.3|2.5,PPR_1|PF12854.3|0.00018,PPR_1|PF12854.3|6e-07,PPR_1|PF12854.3|7.3e-11,PPR_1|PF12854.3|1e-08,PPR_1|PF12854.3|4.8e-10,PPR_1|PF12854.3|4.1e-14,PPR_1|PF12854.3|3e-06,PPR|PF01535.16|8.6e-05,PPR|PF01535.16|1.1,PPR|PF01535.16|0.0056,PPR|PF01535.16|1.7e-05,PPR|PF01535.16|8e-07,PPR|PF01535.16|1.8e-07,PPR|PF01535.16|6.8e-08,PPR|PF01535.16|2.1e-08,PPR|PF01535.16|1.7,PPR_3|PF13812.2|0.038,PPR_3|PF13812.2|2.9,PPR_3|PF13812.2|5.4,PPR_3|PF13812.2|0.31,PPR_3|PF13812.2|4.3e-05,PPR_3|PF13812.2|0.0012,PPR_3|PF13812.2|0.00026,PPR_3|PF13812.2|0.00016,PPR_3|PF13812.2|17,TPR_19|PF14559.2|8.5e+02,TPR_19|PF14559.2|19,TPR_19|PF14559.2|5.6e+03,TPR_19|PF14559.2|0.0064,TPR_19|PF14559.2|4.4e+02,TPR_19|PF14559.2|9.2e+02 S_Transcript_117624:3-959(+)
AATGGTAATGGTTTTGGTGTTCGTCCCGATTGCTATTCTTTTAGCATCCTGATCAATTGTTACTGCCGCTTGGGTCGAGTTGATTTGGGCTTCTCTCTTTTGGGTACTCTTATTAAGCTTGGGTTTGAACTTGATCGTGTTGTCTTCACTACCTTGCTTGATGCCTTCATTCATTGTAATCAGCTGCCACAAGCTCTCTCCTTTTTGAATACCCTTCTTAATCAAGGCTTCCGACCTGACCTTGTCACTTATGGTGCTTTGTTTAAAGGCTTTTGTCAAGTTGGTAACAATGTTGGCGCTCTCTCCTTGCTTACCAAGATTGAATCTTCTGGCCTTTGTCAGCCTGACATTGTCATCTATTCCACCCTCATTGACAGCCTGTTCAAAGACAGGCTATTGACAGAGGCCTTGACTCTCTTTTCTGGAATGAAAAACAAGGGCATCTCCCCTAATGTTGTCACCTACACTTCCCTACTTCGTGGTCTTTGTAGTTTAGGCCGATGGGATGAGGCTAAGGAAGCATTGACTAAGATGTTGGATAGCAATGTAGCACCAAATGTCCAAACTTATAGCATGCTGATTGACATATATTGCAAAGGCGGGAAGGTTGAGCAAGCAAAGTCCATACTCGACTTGATGATTGAGAGAGGTATGTGGCCTAACATTGTTACCTACAGTTCTCTTTTGGATGGATACTGTTTGACAGGCCAAATGGATAAAGCCTCAGAGTTGATGGATCTGATGGCAAAACATGGGTGCCAACCTGATCTTGTCAGCTTCAACACCGTCATCAATGGGTATTGCATGAGTAAGAACCTTGATGATGCTTTCAGGCTGTTCAAAGAAATGCATATCAAAAGATTGAACCCTAATGTAAATACATATAATACTCTTATAGACAGCTGGTGCAAGGGTAATTGGCTCCATTTATTTCCAACATGCACTTCAACTCTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_117624.p1 GENE.S_Transcript_117624~~S_Transcript_117624.p1 ORF type:5prime_partial len:319 (+),score=51.64,PPR_2|PF13041.2|0.013,PPR_2|PF13041.2|7.7e-06,PPR_2|PF13041.2|2.9e-09,PPR_2|PF13041.2|2.4e-17,PPR_2|PF13041.2|1.1e-15,PPR_2|PF13041.2|2.1e-15,PPR_2|PF13041.2|2.5e-16,PPR_2|PF13041.2|3.2e-18,PPR_1|PF12854.3|9.7e-08,PPR_1|PF12854.3|2.5,PPR_1|PF12854.3|0.00018,PPR_1|PF12854.3|6e-07,PPR_1|PF12854.3|7.3e-11,PPR_1|PF12854.3|1e-08,PPR_1|PF12854.3|4.8e-10,PPR_1|PF12854.3|4.1e-14,PPR_1|PF12854.3|3e-06,PPR|PF01535.16|8.6e-05,PPR|PF01535.16|1.1,PPR|PF01535.16|0.0056,PPR|PF01535.16|1.7e-05,PPR|PF01535.16|8e-07,PPR|PF01535.16|1.8e-07,PPR|PF01535.16|6.8e-08,PPR|PF01535.16|2.1e-08,PPR|PF01535.16|1.7,PPR_3|PF13812.2|0.038,PPR_3|PF13812.2|2.9,PPR_3|PF13812.2|5.4,PPR_3|PF13812.2|0.31,PPR_3|PF13812.2|4.3e-05,PPR_3|PF13812.2|0.0012,PPR_3|PF13812.2|0.00026,PPR_3|PF13812.2|0.00016,PPR_3|PF13812.2|17,TPR_19|PF14559.2|8.5e+02,TPR_19|PF14559.2|19,TPR_19|PF14559.2|5.6e+03,TPR_19|PF14559.2|0.0064,TPR_19|PF14559.2|4.4e+02,TPR_19|PF14559.2|9.2e+02 S_Transcript_117624:3-959(+)
NGNGFGVRPDCYSFSILINCYCRLGRVDLGFSLLGTLIKLGFELDRVVFTTLLDAFIHCNQLPQALSFLNTLLNQGFRPDLVTYGALFKGFCQVGNNVGALSLLTKIESSGLCQPDIVIYSTLIDSLFKDRLLTEALTLFSGMKNKGISPNVVTYTSLLRGLCSLGRWDEAKEALTKMLDSNVAPNVQTYSMLIDIYCKGGKVEQAKSILDLMIERGMWPNIVTYSSLLDGYCLTGQMDKASELMDLMAKHGCQPDLVSFNTVINGYCMSKNLDDAFRLFKEMHIKRLNPNVNTYNTLIDSWCKGNWLHLFPTCTSTL*

Click here to download the sequence:
Link to NCBI Protein BLAST