Transcript Information: S_Transcript_117627.p1


Annotated TAIR IDAT1G63080.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:23388884-23390728 | Reverse length=614
E-Value1E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.7025804222324
Condition 2: 8 Hour
Replicate 10.6092968662038
Replicate 21.0653261257013
Replicate 31.6240645794271
Condition 3: 24 Hour
Replicate 10.20804650943423
Replicate 20.64753747360992
Replicate 30.72062984014617


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_117627.p1 GENE.S_Transcript_117627~~S_Transcript_117627.p1 ORF type:internal len:105 (+),score=16.87,PPR_2|PF13041.2|0.0005,PPR_2|PF13041.2|4.6e-11,PPR_1|PF12854.3|2.9e-06,PPR_1|PF12854.3|5.9e-06,PPR|PF01535.16|7.4e+03,PPR|PF01535.16|5.5e-05,PPR|PF01535.16|1.1 S_Transcript_117627:2-313(+)
TTGATTTCGGCTTCTCCCTACTGGGTACTCTCCTCAAGCTTGGCTTTCGACCTAATGATGTTGTCTTCACCACCTTACTGGATGGCTTCATACACTTTGATCAGCTCCCCAAAGGCTCTCTCCTTTTTGGATACCCTTCTTGCCCAAGGCTTCCACCCTAACCTAGTAACCTATGGTGCTTTGTTCAAAGGCTTTTGTCGAGTTGGCAACAATGTTGGTGCTCTCTCTTTGCTTCGGAAGATTGAATCTTCTGGAATTTGTCAGCCCGACATTGTCATCTATAGCACCCTCATTGACAGCCTTTGCAAGGAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_117627.p1 GENE.S_Transcript_117627~~S_Transcript_117627.p1 ORF type:internal len:105 (+),score=16.87,PPR_2|PF13041.2|0.0005,PPR_2|PF13041.2|4.6e-11,PPR_1|PF12854.3|2.9e-06,PPR_1|PF12854.3|5.9e-06,PPR|PF01535.16|7.4e+03,PPR|PF01535.16|5.5e-05,PPR|PF01535.16|1.1 S_Transcript_117627:2-313(+)
LISASPYWVLSSSLAFDLMMLSSPPYWMASYTLISSPKALSFLDTLLAQGFHPNLVTYGALFKGFCRVGNNVGALSLLRKIESSGICQPDIVIYSTLIDSLCKD

Click here to download the sequence:
Link to NCBI Protein BLAST