Transcript Information: S_Transcript_117632.p1


Annotated TAIR IDAT1G62914.1
Annotated Gene Namepentatricopeptide (PPR) repeat-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:23301576-23303162 | Forward length=528
E-Value8E-31
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.40943078823355
Replicate 20.33942753165407
Replicate 30.63840240289387
Condition 2: 8 Hour
Replicate 10.73818658790076
Replicate 20.43022785845628
Replicate 31.0657923802491
Condition 3: 24 Hour
Replicate 10.58813147859292
Replicate 20
Replicate 30.1940157261932


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_117632.p1 GENE.S_Transcript_117632~~S_Transcript_117632.p1 ORF type:complete len:260 (-),score=29.33,PPR_2|PF13041.2|1.4e+04,PPR_2|PF13041.2|0.01,PPR_2|PF13041.2|5.4e-06,PPR_2|PF13041.2|2.5e-08,PPR_2|PF13041.2|8.3e-08,PPR_1|PF12854.3|7.3e-08,PPR_1|PF12854.3|1.1,PPR_1|PF12854.3|0.00014,PPR_1|PF12854.3|0.0074,PPR|PF01535.16|2.5e+03,PPR|PF01535.16|6.5e-05,PPR|PF01535.16|1.7,PPR|PF01535.16|0.0042,PPR|PF01535.16|3.2e+02,PPR_3|PF13812.2|3e+03,PPR_3|PF13812.2|0.029,PPR_3|PF13812.2|10,PPR_3|PF13812.2|3.9,PPR_3|PF13812.2|3.9e+03 S_Transcript_117632:141-920(-)
ATGAATGCTTCAATTGTCGCCTCCCATGCTGGTAACCATCTTCGCCTTCATTTTCCCAGTTCCTTTAATTATTTATTACTATGTCATTCTTTTCAATTTCATTCTTGCCGAAATTACTCAAATGGTAGAACTCAATTTTTATTGAAATTTGTGAGAAAGAAGTTCAATCTAGGGTTTAGAGACCTTGATTACCCCGTCTCTCTTTTCCATTGCATGATCTCTTTGCGTCCCCTCCCTTCCATCATTGATTTCAATCACCTCTTTTCCTCCATTCTCAAGACTAAGAGACCCAGAATTGAACTTGATAAATACCTCCTTGTTATTGCTCTCTCCAAACAGTTGGACTTTCTTAGTAATGGTAATGGTTTTGGTGTTCGTCCCGATTGCTATTCTTTTAGCATCCTGATCAATTGTTACTGCCGCTTGGGTCGAGTTGATTTGGGCTTCTCTCTTTTGGGTACTCTTATTAAGCTTGGGTTTGAACTTGATCGTGTTGTCTTCACTACCTTGCTTGATGCCTTCATTCATTGTAATCAGCTGCCACAAGCTCTCTCCTTTTTGGATACCCTTCTTATTCAAGGCTTCCGACCTGACCTTGTCACTTATGGTGCTTTGTTTAAAGGCTTTTGTCAAGTTGGTAACAATGTTGGCGCTCTCTCCTTGCTTACCAAGATTGAATCTTCTGGCCTTTGTGAGCCCAACATTGTCATCTATTCCACCCTAATTGACAGCCTGATGTTGTCCCCTACACCTCCTTACTCCGTGGTCTTTGTAGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_117632.p1 GENE.S_Transcript_117632~~S_Transcript_117632.p1 ORF type:complete len:260 (-),score=29.33,PPR_2|PF13041.2|1.4e+04,PPR_2|PF13041.2|0.01,PPR_2|PF13041.2|5.4e-06,PPR_2|PF13041.2|2.5e-08,PPR_2|PF13041.2|8.3e-08,PPR_1|PF12854.3|7.3e-08,PPR_1|PF12854.3|1.1,PPR_1|PF12854.3|0.00014,PPR_1|PF12854.3|0.0074,PPR|PF01535.16|2.5e+03,PPR|PF01535.16|6.5e-05,PPR|PF01535.16|1.7,PPR|PF01535.16|0.0042,PPR|PF01535.16|3.2e+02,PPR_3|PF13812.2|3e+03,PPR_3|PF13812.2|0.029,PPR_3|PF13812.2|10,PPR_3|PF13812.2|3.9,PPR_3|PF13812.2|3.9e+03 S_Transcript_117632:141-920(-)
MNASIVASHAGNHLRLHFPSSFNYLLLCHSFQFHSCRNYSNGRTQFLLKFVRKKFNLGFRDLDYPVSLFHCMISLRPLPSIIDFNHLFSSILKTKRPRIELDKYLLVIALSKQLDFLSNGNGFGVRPDCYSFSILINCYCRLGRVDLGFSLLGTLIKLGFELDRVVFTTLLDAFIHCNQLPQALSFLDTLLIQGFRPDLVTYGALFKGFCQVGNNVGALSLLTKIESSGLCEPNIVIYSTLIDSLMLSPTPPYSVVFVV*

Click here to download the sequence:
Link to NCBI Protein BLAST