Transcript Information: S_Transcript_117707.p1


Annotated TAIR IDAT4G03960.1
Annotated Gene NamePhosphotyrosine protein phosphatases superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:1887673-1889000 | Forward length=198
E-Value1.3E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.4826541470311
Replicate 29.1456862695681
Replicate 38.6696622615216
Condition 2: 8 Hour
Replicate 12.2783536663604
Replicate 21.8165176245932
Replicate 33.0060810724974
Condition 3: 24 Hour
Replicate 18.4952324685644
Replicate 28.0388733369095
Replicate 35.6048987566925


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_117707.p1 GENE.S_Transcript_117707~~S_Transcript_117707.p1 ORF type:3prime_partial len:234 (+),score=26.79,Y_phosphatase2|PF03162.9|2.8e-27 S_Transcript_117707:234-932(+)
ATGAAGGTAGACAAATCATCAGATTCCAATAATTGTAGAACCATTGAAGTCACCGTGGTTGACAACCACCACCAACGCCACCGTAACAACCACCACCACCATCTTCAGACCACCGCCACCATCAAATTTAGCAACGATGACTCTAAAATATCTTGCCTTCCTCAAACGAAGGCTCCAGAACAATTAGTAGTTGAAAGAGGAGTCGCCGTTGATGATGGCGTATTTGTTCCGCCATTGAACTTCTCTATGGTCGATAATGGCGTCTTTCGCTCCGGTTTTCCTGACGTCACTAATTTCTCCTTTCTCAATTCCTTAGGCCTTCGCTCTATCATATATCTATGTCCGGAACCGTACCCGGAAGCAAACATGGAGTTTCTTAAGAGCAGCGGGATTAAGCTTTTCCAGTTCGGAATTGAAGGCCACAAGATGTCAACTAAATATAAGCAATGTGATGTTGAATGCTTTACCGAATCCAACGACACAAAGAATATGCTGATTCAATTGGTAGTTTTGAGTTTAGCCATTGAGTGTGATGCAAACTCAGGGACCAAGGCCAATCAACCTCTTCTTATGGAGCCATTTGTCAACATCCCGGACGATATGATACGTGAAGCATTGAACATTGTCCTTGATACAAGGAATCATCCAGTTTTGACACTGCAAAAGAGGAAAGCACCGAACTGGATGCTTGGTGGGATG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_117707.p1 GENE.S_Transcript_117707~~S_Transcript_117707.p1 ORF type:3prime_partial len:234 (+),score=26.79,Y_phosphatase2|PF03162.9|2.8e-27 S_Transcript_117707:234-932(+)
MKVDKSSDSNNCRTIEVTVVDNHHQRHRNNHHHHLQTTATIKFSNDDSKISCLPQTKAPEQLVVERGVAVDDGVFVPPLNFSMVDNGVFRSGFPDVTNFSFLNSLGLRSIIYLCPEPYPEANMEFLKSSGIKLFQFGIEGHKMSTKYKQCDVECFTESNDTKNMLIQLVVLSLAIECDANSGTKANQPLLMEPFVNIPDDMIREALNIVLDTRNHPVLTLQKRKAPNWMLGGM

Click here to download the sequence:
Link to NCBI Protein BLAST