Transcript Information: S_Transcript_117720.p1


Annotated TAIR IDAT3G25430.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:9221204-9223700 | Forward length=618
E-Value7.9E-142
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0094524678364
Replicate 22.4459855385271
Replicate 33.3532247424728
Condition 2: 8 Hour
Replicate 12.3169492805754
Replicate 24.0676088435867
Replicate 33.5447640141321
Condition 3: 24 Hour
Replicate 11.7437157553468
Replicate 22.7136271067023
Replicate 31.1184942086526


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_117720.p1 GENE.S_Transcript_117720~~S_Transcript_117720.p1 ORF type:complete len:451 (+),score=101.30,CAF1|PF04857.16|6.3e-22 S_Transcript_117720:1899-3251(+)
ATGAAACATCTAACAGGGAATTCACTGCTGCGAGCAAATGCAGTGCAATCTTCTCCAGGATCATCAGTTGCTGATTCAGTTTTTATTGAAAGGATCAAATCAAAAGTTCGAACCTGGAGAAGTGCATGCAAGGAAACAGAAGCAAAGGCTGAGGATCCGTTGATCAAATCCCTGAGAAAAGTTGTCCTAGGTGAGCTACATGGATCCAGGCCCTGCATGGACATAGATGTTTGCAGTGAGCGTCAAGTTCCACTTGTTCTAGAGGTGATGAAAGAATTCTCTGAAGACATTGTCCCTTTGATAGTCCCTACGAAGCGCGGGGGTACTCAAGGTGTTCGAATTGTTTTGACAAGTTCAAAAGAGGACAAAATTCTCTTTGAGGAAGAACTTCAAAATCAAGAAGAGGAGCAAAGCAAGCGTGTTCGTGGGTTTCGAGAGGTGATCGATCTGATTTCTGCTTCCCAAAAACCTGTTGTTGCCCACAACTCACTTGATGATTTTACATTCGTTCAATCAAAGTTTCTGAGTCCTTTGCCACCGAGTATTGACGAGTTCAAGAGCTCGTTACAATCAGTTTTCCCATATATCATTGATCTTGGCCATCTGATGAAGGAAATCAGCCCAATGAGAAATGTGAATAATTTACCTGCAGCTTCATCCTTCTTGAGAAGCCGGTTTTTTTCACCTGTTGACGTTGATATTCCACTAAAAGGGATGCCAGACGAGATGAAGGAAGGAAAGATCCATGGGCATAATGTTGTAAGGATAAGTTATCTATTTGCAAAACTACAGTCTGTGCTTCATCGCAGTGACAATGGTGCTAGCTTTGCTTTTGATAACTATGCAAACATCTTCAACCCTGGCTGTGATAGCCCCCTTGAGAACTCTGATGAGGATGTCAGGGTTTTGTCAGGTAGCACAAGGAAACTGAGCTGTGATGATTTGGTCTTCTTATGGGGATTCAGAGATGGCTTGTCTGCGGGAGAGTTAAAAAGACTCCTCAGTGGATCTCATGAAGCTTTTTCTCAAGACTATGATATCCGAGTGTTGGATAAAAGCTGTGCAGTAGTTGCCTTTTGGCATCCTGGTTTGTCAGGTGCTTTCCTGGATGCTATGAATTCTGGGGGATCATTCCATGAAGGATTGAGAGATCTGATCTCCGAAGGCCTGAGAGCAGCAAGTTACCAGACCTACAAGAGGGTTTGTGACATGGGAAAGTGGGATTCAGATTTAGCTGACTCGTTGGACAAAGCTCTAGCGTCCCCTGACCCCTCTCTAGACGATAGTCACAGGAGGAACCCATATGAAATTTGTTGGGATGATGACACTATTGTCAACCTTGATGAGCTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_117720.p1 GENE.S_Transcript_117720~~S_Transcript_117720.p1 ORF type:complete len:451 (+),score=101.30,CAF1|PF04857.16|6.3e-22 S_Transcript_117720:1899-3251(+)
MKHLTGNSLLRANAVQSSPGSSVADSVFIERIKSKVRTWRSACKETEAKAEDPLIKSLRKVVLGELHGSRPCMDIDVCSERQVPLVLEVMKEFSEDIVPLIVPTKRGGTQGVRIVLTSSKEDKILFEEELQNQEEEQSKRVRGFREVIDLISASQKPVVAHNSLDDFTFVQSKFLSPLPPSIDEFKSSLQSVFPYIIDLGHLMKEISPMRNVNNLPAASSFLRSRFFSPVDVDIPLKGMPDEMKEGKIHGHNVVRISYLFAKLQSVLHRSDNGASFAFDNYANIFNPGCDSPLENSDEDVRVLSGSTRKLSCDDLVFLWGFRDGLSAGELKRLLSGSHEAFSQDYDIRVLDKSCAVVAFWHPGLSGAFLDAMNSGGSFHEGLRDLISEGLRAASYQTYKRVCDMGKWDSDLADSLDKALASPDPSLDDSHRRNPYEICWDDDTIVNLDEL*

Click here to download the sequence:
Link to NCBI Protein BLAST