Transcript Information: S_Transcript_117770.p2


Annotated TAIR IDAT2G17650.1
Annotated Gene NameAMP-dependent synthetase and ligase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:7671041-7672936 | Forward length=603
E-Value3.8E-85
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3482059913395
Replicate 21.1680300353978
Replicate 32.2782203397389
Condition 2: 8 Hour
Replicate 12.6343129215282
Replicate 22.631982192909
Replicate 30.87771137196982
Condition 3: 24 Hour
Replicate 12.4414869783605
Replicate 22.1330646189503
Replicate 31.780379605067


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_117770.p2 GENE.S_Transcript_117770~~S_Transcript_117770.p2 ORF type:complete len:170 (+),score=21.11,AMP-binding|PF00501.24|1.6e-15 S_Transcript_117770:901-1410(+)
ATGGGTCCAATGCCAACATATCTATGGACCGTTCCCATGTTCCATTGCAGTGGGTGGTGCCTGCCTTGGGGTGTTTGCCTTAGGATGGTCTCACCCAAGGCTATATTTGACAGCATTGCCCTCCATAAGGTCACCCACTTGGGTGCAGCCCCCACTGTCTTGAACATGATTGTGAACGCACCGGTCAAAGATCAGAGACCTCTGTCTCATAAGGTGAAGGTATGCACGGGAGGATCACCCCCACCGCCTCTGGTTCTGTCCAAGATGGAGGAATTGGGATTTGAATTGACCCACTTGTATGGACTCACCGAGACCTATGGTCCGGGTACTTACTGTGTTTGGAAGCCTGAGTGGAACTCTCTTCCTCCTAGTGAGCGATCAAAGATCAAAGCGAGACAAGGAGTGCAGCACCTAGGCTTGGAGGATGTTGATGTCAGACATCCTGTCACTATGGAGAGTGTTCCAGCTGACGGCAAGTATCGAACATTTTTCTGTAGGATTATTCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_117770.p2 GENE.S_Transcript_117770~~S_Transcript_117770.p2 ORF type:complete len:170 (+),score=21.11,AMP-binding|PF00501.24|1.6e-15 S_Transcript_117770:901-1410(+)
MGPMPTYLWTVPMFHCSGWCLPWGVCLRMVSPKAIFDSIALHKVTHLGAAPTVLNMIVNAPVKDQRPLSHKVKVCTGGSPPPPLVLSKMEELGFELTHLYGLTETYGPGTYCVWKPEWNSLPPSERSKIKARQGVQHLGLEDVDVRHPVTMESVPADGKYRTFFCRIIH*

Click here to download the sequence:
Link to NCBI Protein BLAST