Transcript Information: S_Transcript_117773.p1


Annotated TAIR IDAT2G17650.1
Annotated Gene NameAMP-dependent synthetase and ligase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:7671041-7672936 | Forward length=603
E-Value2.1E-277
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.8987199261729
Replicate 24.8130607792668
Replicate 34.1995402228581
Condition 2: 8 Hour
Replicate 15.4671780908573
Replicate 25.7710819739422
Replicate 35.5665589286894
Condition 3: 24 Hour
Replicate 14.5915997145835
Replicate 24.1502202727388
Replicate 34.1768990734587


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_117773.p1 GENE.S_Transcript_117773~~S_Transcript_117773.p1 ORF type:5prime_partial len:628 (+),score=91.29,AMP-binding|PF00501.24|2.5e-85,AMP-binding_C|PF13193.2|2.7e-22 S_Transcript_117773:2-1885(+)
AGTCAAAGTTTGGGGAAGCCAACTCTATCCAAATTCTCTCTCTCTCAAATGAACCACTTGTTTAGATTAACTCAACTCTCATCTTATGCCAAATCCAAACCCACCCAACTCTTTCCTTCCTTGAATGGTAATATTCGATTACTTTTTCTCTCCTGCTATTCTTCCTCTTCAGCAACCGAACCGAAACCGGAACCGGAACGTGAACCGGAAGCCGGGTCATGGAAGTCCATAGACGGTCTAATGAGATGTTCAGCCAATTATACTCCGTTGACCCCACTCTCTTTCCTAGACCGGTCCGCTAAGGTGTTTCCGGACCGGACCTCCCTGGTTTACTCCGGCTCGAGCGGTGCCCGACAAAGTTGGACATGGAAAGAGACTCGTGAGCGCTGCCTCAAGCTGGCTTCCTCTCTCATCCACCATCTTGGGCTTTCTAAAGGCCATGTTGTTGCAGTACTAGCTCCCAATGTGCCTGCTATATATGAGCTGCATTTTGCTGTACCAATGGCAGGGGCAATCCTTTGTGCTCTTAATTCTCGCCTTGATCCAGCCATGGTGTCTGTCCTACTCGATCATTCAGAAGCCAAGGTCCTTTTTGTGGACCATGAACTACTCAAAATTGCGCAAGAAGCGCTTCATCTCTTGTCTAACAAGGGGTCAAAACTTCCATTGCTTGTCCTGATCAATGATTCTTCAGACACACCCGAAAATGTGTCAAACTTAGTTGACCATGAATATGAAAATCTTCTAGCCAAAGGGGACAGCTCCTTTCATGCTATAGGCCCGAGTGATGAGTGGGATCCAATCAGTGTGAATTACACCTCTGGCACGACGTCTCGTCCTAAGGGAGTTGTGTACAGTCACAGAGGTGCATACCTAAATGCAATCTCTACATTTTTGCTTCATGAAATGGGTCCAATGCCAACATATCTATGGACCGTTCCCATGTTCCATTGCAGTGGGTGGTGCCTTCCTTGGGGTGTCGCGGCTCTAGGGGGCACCAATGTTTGCCTTAGGAAGGTTTCACCCAAGGCCATATTCGACAGCATTGCCCTCCATAAGGTCACCCACTTGGGTGCAGCCCCCACTGTCTTGAACATGATTGTGAACGCACCGGTCAAAGATCAGAGACCTCTGTCTCATAAGGTGAAGGTATGCACGGGAGGATCACCCCCACCGCCTCTGGTTCTGTCCAAGATGGAGGAATTGGGATTTGAATTGACCCACTTGTATGGACTCACCGAGACCTATGGTCCGGGTACTTACTGTGTTTGGAAGCCTGAGTGGAACTCTCTTCCTCCTAGTGAGCGATCAAAGATCAAAGCGAGACAAGGAGTGCAGCACCTAGGCTTGGAGGATGTTGATGTCAGACATCCTGTCACTATGGAGAGTGTTCCAGCTGACGGTAAAACAACAGGAGAGATAATGTTCAAAGGAAATACTGTGACGAGTGGATACTTGAAGGATTTAAATGCAACAAAGGAAGCTTTTAAAGGGGGTTGGTTTCACAGTGGTGATCTTGCTGTGAAAGACCCTGACAATTATATTCAAATCAAGGATCGCTTGAAGGATGTCATTATTTCTGGGGGCGAGAACATAAGCACAGTTGAAGTTGAGACAGTGTTGTATAGTCATCCAGCAATTCTCGAGGCTGCTGTTGTGGCACGGCCTGATAACCACTGGGGGGAGACTCCTTGTGCATTTGTCACATTGAAGGATGGATGTGAGGCTACTGAGCAGGAAATTATTACATTTTGTAGGGAGAACTTGCCTCATTACATGGCTCCCAAGAGTGTCATTTTTGATGAGATGCCGAAAACAACAACAGGTAAAATACAGAAGTTCATTCTTAAGATAAAGGCAAAAGCCTTGGGAAGCCTTTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_117773.p1 GENE.S_Transcript_117773~~S_Transcript_117773.p1 ORF type:5prime_partial len:628 (+),score=91.29,AMP-binding|PF00501.24|2.5e-85,AMP-binding_C|PF13193.2|2.7e-22 S_Transcript_117773:2-1885(+)
SQSLGKPTLSKFSLSQMNHLFRLTQLSSYAKSKPTQLFPSLNGNIRLLFLSCYSSSSATEPKPEPEREPEAGSWKSIDGLMRCSANYTPLTPLSFLDRSAKVFPDRTSLVYSGSSGARQSWTWKETRERCLKLASSLIHHLGLSKGHVVAVLAPNVPAIYELHFAVPMAGAILCALNSRLDPAMVSVLLDHSEAKVLFVDHELLKIAQEALHLLSNKGSKLPLLVLINDSSDTPENVSNLVDHEYENLLAKGDSSFHAIGPSDEWDPISVNYTSGTTSRPKGVVYSHRGAYLNAISTFLLHEMGPMPTYLWTVPMFHCSGWCLPWGVAALGGTNVCLRKVSPKAIFDSIALHKVTHLGAAPTVLNMIVNAPVKDQRPLSHKVKVCTGGSPPPPLVLSKMEELGFELTHLYGLTETYGPGTYCVWKPEWNSLPPSERSKIKARQGVQHLGLEDVDVRHPVTMESVPADGKTTGEIMFKGNTVTSGYLKDLNATKEAFKGGWFHSGDLAVKDPDNYIQIKDRLKDVIISGGENISTVEVETVLYSHPAILEAAVVARPDNHWGETPCAFVTLKDGCEATEQEIITFCRENLPHYMAPKSVIFDEMPKTTTGKIQKFILKIKAKALGSLS*

Click here to download the sequence:
Link to NCBI Protein BLAST