Transcript Information: S_Transcript_117801.p2


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value1E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.081019753526
Replicate 215.263565102683
Replicate 315.194958660073
Condition 2: 8 Hour
Replicate 117.704097621771
Replicate 225.045214200449
Replicate 319.438980520266
Condition 3: 24 Hour
Replicate 116.074536908173
Replicate 215.251747413014
Replicate 314.435258118651


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_117801.p2 GENE.S_Transcript_117801~~S_Transcript_117801.p2 ORF type:complete len:159 (+),score=23.60,RVT_1|PF00078.23|5.4e-17 S_Transcript_117801:1380-1856(+)
ATGCCTTTTGCTCTATGCAGAACTGCTTCAATTAGTTTTGATTTCGCTAGTGTTACTTGTGTCCAGTGGAGGATTCTAGCAAAGAGAAACTCTGGTTATCCAGCTTATAAGATCACGAACAGATACACATTTACCATGATGATGGTGACCTTTGCAGAATTAGAGGTGCAATGGTTCAGAGGCAAACGTGGCCTGAGGCAGGGATACCCTATTTCCCCTTACCTATTTGTGCTCTGTATGGAAGCTTTATCTAGAATGCTCCGGAAATTGAAAGATCAGAAGGGATTCTCTTTTCATCCCAAGTGTGCTAGGGTGGGAATAACCCATTTGGTCTTTGATGATGACTTGTTGATTTTCACTAGAGGGGATGTCCCTTCTGTTAATTCTGCTGTTAGCAAGGTCCAGGAATTCTCTCAGATGTTTGGTCTCCATATCAACTCCCAGAAGTCAAATATTTACTTTGGGGGGCATAAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_117801.p2 GENE.S_Transcript_117801~~S_Transcript_117801.p2 ORF type:complete len:159 (+),score=23.60,RVT_1|PF00078.23|5.4e-17 S_Transcript_117801:1380-1856(+)
MPFALCRTASISFDFASVTCVQWRILAKRNSGYPAYKITNRYTFTMMMVTFAELEVQWFRGKRGLRQGYPISPYLFVLCMEALSRMLRKLKDQKGFSFHPKCARVGITHLVFDDDLLIFTRGDVPSVNSAVSKVQEFSQMFGLHINSQKSNIYFGGHK*

Click here to download the sequence:
Link to NCBI Protein BLAST