Transcript Information: S_Transcript_117888.p1


Annotated TAIR IDAT4G25240.1
Annotated Gene NameSKU5 similar 1
Annotated Gene Symbol(s)SKS1
Annotation TypeOrtholog
Chromosome Positionchr4:12930539-12933563 | Forward length=589
E-Value1.6E-300
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.9464443901996
Replicate 26.2822858401059
Replicate 34.751348957131
Condition 2: 8 Hour
Replicate 13.2891703709476
Replicate 22.4267768015975
Replicate 33.2876985289039
Condition 3: 24 Hour
Replicate 13.628472173014
Replicate 23.3803651164721
Replicate 32.9924459463697


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_117888.p1 GENE.S_Transcript_117888~~S_Transcript_117888.p1 ORF type:complete len:590 (+),score=106.31,Cu-oxidase|PF00394.18|6.2e-43,Cu-oxidase|PF00394.18|2.4e+02,Cu-oxidase_3|PF07732.11|4.7e-37,Cu-oxidase_3|PF07732.11|4.2,Cu-oxidase_3|PF07732.11|1.2e+04,Cu-oxidase_2|PF07731.10|1.3e+02,Cu-oxidase_2|PF07731.10|1.6e+03,Cu-oxidase_2|PF07731.10|1.2e-24 S_Transcript_117888:140-1909(+)
ATGGCGGTGAAGATGGTGTTCTTGGTTTATTTTGTGTTAGCTGGGTTTATTTTAAGGGGGTGTTTGGGTGCTGACCCTTACGCTAATTTCCAGTTCACTTACTCTTACAAAACCCTTTCTCCTCTTGGCGTTCCTCAACAGGTTATAGTGGTCAATGATAAATTTCCTGGTCCTCCAATTGAAGTCATCACTAATTACAATGTTGTTGTTGATGTGAAAAACAAATTAGATGAAGACCTTCTGGTTAACTGGGCTGGAATTCATATGCAGCATGATTCTTGGCAAGATGGTGTGCCAGGAACAAATTGTGCCATACCTCCCGGTTGGAATTTCACCTATCAGTTCCAGGCTAAGGATCAAATTGGAAGCTTCTTTTACCAGCCTTCAATCAATTTTCAAAGAGCTTCTGGTGGGTTTGGCCCCTTTATGATTGACAACAGGAGCATTATCCCCCTGCCTTTCAATAAGCCAGATGGGGATATCGTCCTTATGATTGGTGACTGGTATACTCGAGACCATAAGGCACTCAGGGCTGACTTGGATGCTGGGAAGGATTTGGGTATGCCGGATGGGGTTCTTATCAATGGAAAGGGACCTTACCAATATAATAATACCCTTGTTCCAGATGGTATTGAGTATGAAACTATTAAGGTTGACCCAGGGAAAACATATCGTGTTCGAGTGCACAATATTGGAATCTCAACTAGTTTGAATTTTAGAATTCAAGGCCACAATCTGCTTCTGGCCGAAACTGAAGGATTTTACACATCACAGGCAAACTTCAGTACCTTTGACATCCATGTTGGACAGTCGTATTCTTTTCTTGTTACGATGGATCAGAATGCTAGCACTGATTACTACATTGTAGCAAGTGCGAGGTTTGTAAATGAATCTGTTTGGCAAAGAGTCACTGGTGTCGCCATCTTGCAATATTCCAATTCCAAAGGAAAAGCAGCAGGCCCTCTTCCTGATCCTCCAAATGATCAATATGACAAGACTTGGTCATTGAACCAGGCAAGATCTGTCAGGCAAAATGGTTCTGCAAGTGGAGCTCGCCCAAACCCACAAGGTTCATTTCACTATGGCAGTATTAATGTGACTGATACGTACATCTTCCAGAGTTTGCCACCAACAACAATCAAGGGGAAACATCGTGCTACGCTAAATGGGATCTCATTTGTTGATCCTGCTACTCCGATTAGGCTTGCTGACTGGAAAAATGTCAAGGGTGACTACAAGCTGGATTTTCCAAGTAAGCCGCTTACAGGACGGCCACGGTTGGATACATCAGTCATAAACGGTACATTTAAAGGATTTGCTGAAATTGTATTTCAGAACAATGATACCGTGATGCAGACCTTTCACATGGACGGGTTTTCATTTTATGTTGTTGGAATGGATTACGGTATTTGGACAAATGATAGCCGGGGTAGCTACAACAAGTGGGATGCAGTTTCCCGCTGTACTGTACAGGTTTTCCCTGGGGGTTGGACAGCAGTCTATGTTTACCTAGACAATGAAGGTGCATGGAACATCAGAACAGAAAATCTCGATAGATGGTATCTTGGCCAAGAAACCTATATTAGACTCATCAACCCAGAACTTAAGGCTACCGAATTTTCACCTCCTGACAATGTTATGTACTGTGGTGCTCTGGCTGGGTTGCAAAAGAAGCAAAACTATGCAACGTCAATGAAGGGGAACATAAGGTTGCTCGTCATCCTGCTGATGGTTGCCCTCATCGCCCCTCCTGCTGCGCTAAGTTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_117888.p1 GENE.S_Transcript_117888~~S_Transcript_117888.p1 ORF type:complete len:590 (+),score=106.31,Cu-oxidase|PF00394.18|6.2e-43,Cu-oxidase|PF00394.18|2.4e+02,Cu-oxidase_3|PF07732.11|4.7e-37,Cu-oxidase_3|PF07732.11|4.2,Cu-oxidase_3|PF07732.11|1.2e+04,Cu-oxidase_2|PF07731.10|1.3e+02,Cu-oxidase_2|PF07731.10|1.6e+03,Cu-oxidase_2|PF07731.10|1.2e-24 S_Transcript_117888:140-1909(+)
MAVKMVFLVYFVLAGFILRGCLGADPYANFQFTYSYKTLSPLGVPQQVIVVNDKFPGPPIEVITNYNVVVDVKNKLDEDLLVNWAGIHMQHDSWQDGVPGTNCAIPPGWNFTYQFQAKDQIGSFFYQPSINFQRASGGFGPFMIDNRSIIPLPFNKPDGDIVLMIGDWYTRDHKALRADLDAGKDLGMPDGVLINGKGPYQYNNTLVPDGIEYETIKVDPGKTYRVRVHNIGISTSLNFRIQGHNLLLAETEGFYTSQANFSTFDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESVWQRVTGVAILQYSNSKGKAAGPLPDPPNDQYDKTWSLNQARSVRQNGSASGARPNPQGSFHYGSINVTDTYIFQSLPPTTIKGKHRATLNGISFVDPATPIRLADWKNVKGDYKLDFPSKPLTGRPRLDTSVINGTFKGFAEIVFQNNDTVMQTFHMDGFSFYVVGMDYGIWTNDSRGSYNKWDAVSRCTVQVFPGGWTAVYVYLDNEGAWNIRTENLDRWYLGQETYIRLINPELKATEFSPPDNVMYCGALAGLQKKQNYATSMKGNIRLLVILLMVALIAPPAALSF*

Click here to download the sequence:
Link to NCBI Protein BLAST