Transcript Information: S_Transcript_117950.p1


Annotated TAIR IDAT1G50930.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20557.1); Has 215 Blast hits to 213 proteins in 63 species: Archae - 0; Bacteria - 2; Metazoa - 83; Fungi - 10; Plants - 45; Viruses - 5; Other Eukaryotes - 70 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:18876898-18877706 | Forward length=196
E-Value0.0004
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2770482340261
Replicate 21.6517596460171
Replicate 31.4793638569733
Condition 2: 8 Hour
Replicate 12.166750887837
Replicate 23.469431072471
Replicate 31.9378043277256
Condition 3: 24 Hour
Replicate 13.5045267631969
Replicate 22.0603465069407
Replicate 31.3487724280811


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_117950.p1 GENE.S_Transcript_117950~~S_Transcript_117950.p1 ORF type:complete len:187 (+),score=40.19 S_Transcript_117950:529-1089(+)
ATGGATGACTCATTGAGCTCCACAAACTACAAGTTCAACGATCATTATTCAGTTGCCAGGCTTGAGTTTTCTTCTGAGGATAGTGGTTGGTCTTTATATCTTGAAGACTCCATCACCAGCAACTATACAGAAGAAAGTGTTGTCTTCTGTCGCTCTGAAAGTTCTTTGTTGTTTCCTGATGCTCTCTGTTCAGTGAAAAGAATCTGTCCAAGTGATGTTCACGTTGCATCAGCTGGATCCATCTTGAAAAGGAGAAAAACAAAACCAACTTTTGTTGATCATGAATTGGAGGACACTGCAAGCTCACCTTTGTGTCGTTCCAAGGTGCAAGGCTTGGAGCAGGACTATGCAGAATTGCAAGAGAGAGAGTACAGTTTGGATAAATTGCCACCAGAACAACTAGGCAAGCATGATCGTAGAAACTTTTCTGAGGAAAAAAGCGCAGCCTCTGACAATGAAGCAATGCACTCGCCTTTTGTTGGGAAAGATATCAAATATACAGAACTAAGGCAAAAGGGACTTTGTTTACTTCCTATATCTATGTTATTCAACTTCTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_117950.p1 GENE.S_Transcript_117950~~S_Transcript_117950.p1 ORF type:complete len:187 (+),score=40.19 S_Transcript_117950:529-1089(+)
MDDSLSSTNYKFNDHYSVARLEFSSEDSGWSLYLEDSITSNYTEESVVFCRSESSLLFPDALCSVKRICPSDVHVASAGSILKRRKTKPTFVDHELEDTASSPLCRSKVQGLEQDYAELQEREYSLDKLPPEQLGKHDRRNFSEEKSAASDNEAMHSPFVGKDIKYTELRQKGLCLLPISMLFNFC*

Click here to download the sequence:
Link to NCBI Protein BLAST