Transcript Information: S_Transcript_117997.p1


Annotated TAIR IDAT3G46790.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)CRR2
Annotation TypeOrtholog
Chromosome Positionchr3:17231975-17233948 | Reverse length=657
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.1393370648777
Replicate 25.7799224140196
Replicate 35.0248173161906
Condition 2: 8 Hour
Replicate 17.0233321403731
Replicate 26.2627779874684
Replicate 35.2651419982364
Condition 3: 24 Hour
Replicate 16.21336506469
Replicate 25.9373757872167
Replicate 36.3810262042884


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_117997.p1 GENE.S_Transcript_117997~~S_Transcript_117997.p1 ORF type:complete len:668 (+),score=125.81,PPR|PF01535.16|0.41,PPR|PF01535.16|1.2e+03,PPR|PF01535.16|9.5,PPR|PF01535.16|0.00032,PPR|PF01535.16|0.22,PPR|PF01535.16|1.8e-08,PPR|PF01535.16|0.055,PPR|PF01535.16|6.2e-08,PPR|PF01535.16|0.17,PPR|PF01535.16|0.11,PPR|PF01535.16|7e+03,PPR|PF01535.16|8.1e+02,PPR_2|PF13041.2|1,PPR_2|PF13041.2|4.9e+03,PPR_2|PF13041.2|2.1e+02,PPR_2|PF13041.2|2.4e-06,PPR_2|PF13041.2|15,PPR_2|PF13041.2|7e-10,PPR_2|PF13041.2|1.6,PPR_2|PF13041.2|4.1e-10,PPR_2|PF13041.2|0.9,PPR_2|PF13041.2|0.78,PPR_2|PF13041.2|4.4e+03,DYW_deaminase|PF14432.2|4e-40,PPR_1|PF12854.3|0.002,PPR_1|PF12854.3|4.9e+02,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|2.9e+02,PPR_1|PF12854.3|6.7e-06,PPR_1|PF12854.3|3.5,PPR_1|PF12854.3|0.00074,PPR_1|PF12854.3|12,PPR_1|PF12854.3|0.0053,PPR_3|PF13812.2|23,PPR_3|PF13812.2|5.8,PPR_3|PF13812.2|4.4,PPR_3|PF13812.2|1.7e+02,PPR_3|PF13812.2|0.00063,PPR_3|PF13812.2|0.013,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|0.25,PPR_3|PF13812.2|1.1e+04,PPR_3|PF13812.2|5.1e+03 S_Transcript_117997:531-2534(+)
ATGTGGGCACTTCTCTCTCCTCAAGTTATCCAACAACCAATCTTTCTTTTACCCATCAAATGCAAAGCTGCTGTTGCTTCTTCTTCTTCTTCTATTATCAAGGCAAACCAATCCACACACTTAAATTCTTCCCATTCTTCAACACCCACCTCTAATTCCAACACCCCCACAAACAACACCACCTTAATTCAATCACTATGCAAAAAGGGCAGCCTCAAACAAGCCCTTCAACTTCTTCCTTCAGAACCCAACCCTACCCAACTAACTTACGAGCTCTTAATCCTCTCTTGTGCCCTCCAAAACTCTCTTTCAGATGCTCATATTGTTCATCGCCACCTTATCGAAAATGGGTTTGGCCATGATCCTTTCCTTGCCACTAAATTGATCAATATGTACTCTGAATTGGAGTGCATTGACTATGCACGCCAAGTGTTCGATGAAATTCCTAGGAGAACTATTTTTGTTTGGAATGCCATTTTGCGTGCGCTTTCGTTGGCGGGACATGGGGTTGAGGCATTGAGTCTTTATAGGGAGATGAATAGGATTGGAATGCCTTGTGATAGGTTTACTCATACTTATGCACTTAAGGCTTGTGTCGTGGCCGAAGCGGTTACTTCGTTGTTAAAGAAAGGGAAGGAGATTCATGGGCGTGGTTTGCGTCACGGGTATGAATCACATGTTCACATTATGACTACACTGTTGGATATTTATGCTAAGTTTGGGAAGGTATTGTATGCGAGGCATATTTTCTGTTTGATGCCTGTTAAGAATGTTGTCTCATGGAGTGCTATGATTGCTTGTTATGCTAAGAACGGGAGATCCTTTGAGGCTTTGGAGTTGTTTCATGAGATGGTTGATGGGAATCCTGATCTTTCGCCTAATTCAGTGACTATGGTTAATGTGCTTCAAGCATGTGCTGCTCTTGCGGCTTTGGGTCAGGGCAAGATGATGCACTGTTATATATTGAGAAGGGATCTCAACTCCATATTGCCAGTTAGTAGCGCCCTCTTGACAATGTATGCAAGATGTGGCAATCTCAAAGTGGCGCAACTGGTTTTTGATCAGATGCATAAGAGGGATGTTGTTTCGTGGAATTCGTTGATTTCGAGTTATGGGATTCATGGTTTTGGGATGAAGGCTGTTCAGATCTTCGAGGAGATGATTGATCGAGGAATTAAACCAACTGCCATCTCATTTGTTAGTGTGTTGGGTGCTTGCAGCCATGCAGGGCTTGTTGATGTGGGGAAACGGTTATTTAAATCTATGGTCCAGCATCATGGGATATATCCGAGTGTAGAGCATTATGCGTGCATGGTGGATCTTCTAGGCCGTGCCAATCAATTAGATGAGGCAGCTGAAATTATAGAAGATATGAGGATTGAGCCAGGACCAAAAGTTTGGGGTTCTCTCCTTGGCTCCTGCAGGATTCACTGTAATGTTGAGCTTGCAGAGAAAGCAAGCAATCAACTATTCGAGCTTGAGCCCACCAATGCTGGAAATTACGTTCTGTTAGCAGATATTTATGCAGAAGCAAGGATGTGGAACGAGGTTAAACGAGTGAAGAACCTCCTAGAAGCGAATGGATTGCAGAAGGTCTCTGGCCGGAGTTGGATTGAAGTGAGAAGGAAGATATACTCCTTCAAGTCAGTTGATGAGCTTAATCCACAGATAGAGCAAATTCATGCTTTGTTAGTTGAGCTTTCGGGGGAGATGAAGCAGCAGGGCTATGTCCCACAGACCAAAGTTGTGCTCTATGATCTTGATGAGAAAGAGAAGGAAAGGATTCTCTTGGGACACAGTGAAAAACTTGCAGTTGGCTTTGGACTCATAAATACCAGCAAGGGTGAAACAATCAGGATCACCAAGAACTTGAGGTTATGTGAAGATTGTCACACTGTGACCAAGTTCATTTCAAAATTTACAGGAAGAGAGATCATGGTTCGAGATGTTAATCGCTTTCACCATTTCCGTGATGGGGTTTGCTCTTGTGGGGATTACTGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_117997.p1 GENE.S_Transcript_117997~~S_Transcript_117997.p1 ORF type:complete len:668 (+),score=125.81,PPR|PF01535.16|0.41,PPR|PF01535.16|1.2e+03,PPR|PF01535.16|9.5,PPR|PF01535.16|0.00032,PPR|PF01535.16|0.22,PPR|PF01535.16|1.8e-08,PPR|PF01535.16|0.055,PPR|PF01535.16|6.2e-08,PPR|PF01535.16|0.17,PPR|PF01535.16|0.11,PPR|PF01535.16|7e+03,PPR|PF01535.16|8.1e+02,PPR_2|PF13041.2|1,PPR_2|PF13041.2|4.9e+03,PPR_2|PF13041.2|2.1e+02,PPR_2|PF13041.2|2.4e-06,PPR_2|PF13041.2|15,PPR_2|PF13041.2|7e-10,PPR_2|PF13041.2|1.6,PPR_2|PF13041.2|4.1e-10,PPR_2|PF13041.2|0.9,PPR_2|PF13041.2|0.78,PPR_2|PF13041.2|4.4e+03,DYW_deaminase|PF14432.2|4e-40,PPR_1|PF12854.3|0.002,PPR_1|PF12854.3|4.9e+02,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|2.9e+02,PPR_1|PF12854.3|6.7e-06,PPR_1|PF12854.3|3.5,PPR_1|PF12854.3|0.00074,PPR_1|PF12854.3|12,PPR_1|PF12854.3|0.0053,PPR_3|PF13812.2|23,PPR_3|PF13812.2|5.8,PPR_3|PF13812.2|4.4,PPR_3|PF13812.2|1.7e+02,PPR_3|PF13812.2|0.00063,PPR_3|PF13812.2|0.013,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|0.25,PPR_3|PF13812.2|1.1e+04,PPR_3|PF13812.2|5.1e+03 S_Transcript_117997:531-2534(+)
MWALLSPQVIQQPIFLLPIKCKAAVASSSSSIIKANQSTHLNSSHSSTPTSNSNTPTNNTTLIQSLCKKGSLKQALQLLPSEPNPTQLTYELLILSCALQNSLSDAHIVHRHLIENGFGHDPFLATKLINMYSELECIDYARQVFDEIPRRTIFVWNAILRALSLAGHGVEALSLYREMNRIGMPCDRFTHTYALKACVVAEAVTSLLKKGKEIHGRGLRHGYESHVHIMTTLLDIYAKFGKVLYARHIFCLMPVKNVVSWSAMIACYAKNGRSFEALELFHEMVDGNPDLSPNSVTMVNVLQACAALAALGQGKMMHCYILRRDLNSILPVSSALLTMYARCGNLKVAQLVFDQMHKRDVVSWNSLISSYGIHGFGMKAVQIFEEMIDRGIKPTAISFVSVLGACSHAGLVDVGKRLFKSMVQHHGIYPSVEHYACMVDLLGRANQLDEAAEIIEDMRIEPGPKVWGSLLGSCRIHCNVELAEKASNQLFELEPTNAGNYVLLADIYAEARMWNEVKRVKNLLEANGLQKVSGRSWIEVRRKIYSFKSVDELNPQIEQIHALLVELSGEMKQQGYVPQTKVVLYDLDEKEKERILLGHSEKLAVGFGLINTSKGETIRITKNLRLCEDCHTVTKFISKFTGREIMVRDVNRFHHFRDGVCSCGDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST